Methylophaga pinxianii: LGT42_008030
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Entry
LGT42_008030 CDS
T08312
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpin01002
]
LGT42_008030
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mpin01011
]
LGT42_008030
Peptidases and inhibitors [BR:
mpin01002
]
Cysteine peptidases
Family C82
LGT42_008030
Peptidoglycan biosynthesis and degradation proteins [BR:
mpin01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LGT42_008030
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UPH44469
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All DBs
Position
complement(1663765..1665474)
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AA seq
569 aa
AA seq
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MHILLPKWCALTACLLTISVLSSHVLAVNNSQGDFASDLAPIMSDGELCRVPDSSKSQSQ
AVWLQSLYGNSFSAPLWTDAERYDALLAALADLKWDGLDPDMYGLLQLEEWRAIGSNNSE
TLACRDLLASTAYLAALYHLQFGLLDRSDIAPLWRLAEDESNGAEAMSLDDLGVVARSGL
QNITAAIDRARPKSPAYRQLRSAYKIWHHQYRDVIWPNLPPGPLLRPGMEDARVSILRQR
LIPLINGVDQQIVRHSYSADHYDAELVEMVKNFQARHRLKVDGVVGPETRDALNLSQSFR
EEQLQINLERMRWLEREFSPTLLLVDIAGAQASFTRDGQIVWQGRVQVGTARRPTPTLRS
SVSYLTFSPTWTVPPTIYRQDKLPEIRRDITYLAKNRLRVLDPDGRELNPASIDWQNPGP
VKLRQDPGPGNALGLVVFRFPNPFSVFLHDTPNQSLFASHRRTYSSGCVRVEGAKQLADE
LFAGATQETHNAINEALIKKQTRNIALPSSVPILMDYWTAVALEDGRVEFRPDVYRRDEE
LVAALKVQQRTIINSLLTELSPEEHPAMR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
ttgcacattttgttaccaaagtggtgtgctttgactgcatgccttttgaccatctcggta
ttgtccagtcatgtattggcggtgaataactctcaaggagatttcgccagcgatcttgct
ccgattatgtcagacggtgaactttgtcgggtgccggattccagcaagtcgcaatcacag
gcagtctggttgcagagcttatacggtaacagcttctcggctccgctgtggaccgatgcc
gagcgttatgatgccttgcttgctgcgcttgcggatctaaaatgggatggcctggatcct
gatatgtatggcctcttgcagctggaagaatggcgagcaatcggtagcaataatagtgaa
accttggcttgccgcgatctattggcgtctaccgcttatctggctgcgctctaccacttg
cagtttggtttactcgatcgatcagatattgctccactctggcgactcgctgaggatgaa
agcaacggtgcagaagcaatgtcacttgatgatcttggtgttgtggcacgcagtgggctg
cagaatatcaccgctgccattgatcgcgcccggccgaaatctcctgcatatcgacaatta
cgttcagcctacaagatctggcaccatcaatatcgtgacgtaatctggccgaacttgcca
cctggtccactgctgagacccggtatggaggatgccagagtatcgatcctgcgccaacga
ttgataccacttatcaacggcgtcgatcagcaaatcgttcgtcattcctatagcgctgat
cactacgatgcagaactggtggaaatggtgaaaaattttcaggcccgtcatcgcctaaag
gtagacggagttgtggggcccgagacgcgggatgcacttaatctttcacaaagttttcgc
gaggaacagttacagattaacctggagcgtatgcgctggctggagcgggaattctcgccc
accctgttgctggttgacattgccggtgcccaggctagttttacccgcgatggacaaatc
gtctggcaaggcagggtgcaggtgggtactgcccgccgccctactcccacactcagatcc
tccgtgtcgtatctcactttcagccccacttggacagtgccacccaccatttatcgtcag
gacaagctgccggagatccggcgggatataacttaccttgccaaaaatcggctaagggta
ctggatccggatggacgcgagctgaaccctgccagtattgactggcaaaatccaggacct
gtaaagctgcgtcaagaccccggtccaggcaatgccctgggtctggtggtattccgattt
cccaaccctttttccgtattcctgcatgacactcctaaccagagtctgtttgccagtcac
aggcgtacctacagctcaggctgtgtacgtgtagaaggggccaaacaactggctgatgaa
ctctttgccggtgcaactcaggaaacccataacgcgataaacgaggctctgataaagaaa
cagacacgtaatattgccttaccttccagcgtaccgatcttgatggactactggacagcg
gtggcgttggaagatggccgggtggaattcagacccgatgtgtatcgacgcgatgaagaa
ttagtggccgccttgaaagtacaacaaagaacaataataaattctctattaactgaatta
tcgcctgaagaacaccctgcaatgaggtaa
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