Methylophaga pinxianii: LGT42_008175
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Entry
LGT42_008175 CDS
T08312
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpin03032
]
LGT42_008175 (gyrA)
03400 DNA repair and recombination proteins [BR:
mpin03400
]
LGT42_008175 (gyrA)
Enzymes [BR:
mpin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LGT42_008175 (gyrA)
DNA replication proteins [BR:
mpin03032
]
Prokaryotic type
DNA Topoisomerases
LGT42_008175 (gyrA)
DNA repair and recombination proteins [BR:
mpin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LGT42_008175 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
DUF4851
Motif
Other DBs
NCBI-ProteinID:
UPH44495
LinkDB
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Position
1689496..1692081
Genome browser
AA seq
861 aa
AA seq
DB search
MSEIALELDSISIEDEMKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNSWN
SPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQPFSMRYMLVDGQGNFGSVDGDPPAAM
RYTEVRMAKIAHEMLADLDKETVDFIPNYDESESEPAVLPTRFPALLVNGSSGIAVGMAT
NIPPHNLTEILNACIAIIDDPSVTTRDLMEYVPGPDFPTAGIINGANGIAEAYETGRGRV
YMRARAEIETNEATGQQSIIVHELPYQVNKARLLEKIAELVKEKKIEGISALRDESDKDG
MRMVIVIKRGDVPEVILNNLYQQTQLQTVFGINMVAIVDGQPRTLGLKPILEAFIRHRRE
VVTRRSIYELRKARERAHILEGLATALANIDEVIELIKASPSPSEAREALLTRGWRSEMI
LEMLGAAGAQASRPEDLAAEFGLVDGQYYLSPVQAQAILDMRLHRLTGLEQDKILQEYRE
VLDQIRDLLAILSDPDNLMAVIRGELVAINDEYGDKRRTEILDTHLDLTLEDLITEEEMV
VTLSHAGYAKTQQLDTYQAQRRGGKGKAATSMKDEDFIEHLFIANTHDTLLCFSSTGKVY
WKKVYELPQGGRTARGKPIVNLLPLEENERINAVLPIREFEADKFIFMATASGTVKKTPL
VDYSRPRANGIIAVDLKEDDKLVGVALTDGLSDVMLFSSNGKVIRFPETDVRSMGRVSRG
VRGMRLADGEQIISLIIAQQEGAILTATEFGYGKRTNLEEYRVQGRGGQGIISIQTSARN
GHVVGAVQVREEDQIMLITNGGTLVRTPVKHVSLVGRNTQGVRLINLSNDEKLVGLERVI
EDEDEEVDIENLPHTDDLTEE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagattgctctggaactggactcgatcagtatcgaagatgaaatgaaacagtcc
tacctggattacgcaatgagcgttatcgtaggtcgtgccttaccggatgtccgggacggc
ctgaaaccggttcaccgtcgtgtgttatatgccatgcgggaactgggaaacagctggaac
agcccatacaaaaaatctgctcgtatcgtcggtgacgttatcggtaagtaccacccacat
ggtgatacagcggtatatgacacgatggtacggatggctcagccattctcaatgcgttac
atgctggttgatggtcagggtaactttggttcagtggatggtgatccaccggccgcgatg
cgttacaccgaagttcgtatggcgaaaatcgcccacgaaatgctggccgatctggacaaa
gaaactgttgatttcatccccaactatgatgaatccgaatcagagccagccgttttaccg
acccgattccctgctttattagttaatggttcatctggtatagccgtcggtatggcgacc
aacattccgccgcataacctgactgaaattctcaatgcctgtattgcgatcattgatgat
ccgagtgtcaccacgcgtgatttgatggaatacgttccgggtccggattttccaactgcc
ggtattatcaacggtgccaatggtattgccgaagcttatgaaaccggtcgcggccgcgtt
tatatgcgagctcgtgccgaaattgaaacgaatgaagcaacgggtcagcaaagtatcatc
gtgcatgagctgccctatcaagtaaacaaagcccgtctgctggaaaaaattgctgagtta
gttaaagagaaaaaaatcgaaggtatttctgccctgcgtgatgagtctgataaagatggt
atgcgcatggtgatcgtcatcaaacgtggcgacgtgcctgaagtcattctgaacaatctg
tatcagcaaacccagttacaaaccgtgtttggtatcaatatggtggcgatcgttgatggt
cagccgcgtacattgggtctcaaaccgattcttgaagcgtttattcgtcatcgccgtgag
gttgttacccgtcgttcgatttatgagctgcgtaaagcgcgtgaacgtgcacatatattg
gaaggtctggcgacagccctggccaatatcgatgaagttattgaactgattaaagcatca
ccaagtccgtctgaagccagagaggccttattaacccggggctggcgcagtgagatgatc
ctggaaatgttgggcgctgcaggcgctcaggcttctcgtccagaagatttagcggctgag
ttcggtctggttgatggtcagtactatttatcacctgtgcaagctcaggccattctggac
atgcgtctgcacagattgaccggtcttgaacaagacaagattctgcaggaatatcgtgaa
gtattggatcaaatccgtgatttgctggctatcttgagtgatcctgacaatttgatggcc
gttatccgtggtgaactggtcgcgattaatgatgagtacggtgataagcgtcgtaccgag
attcttgatacccatctggatctgacgcttgaagatctgatcacagaagaagaaatggtg
gtcaccttatcccatgccggctatgccaaaacgcagcaattggatacctatcaggcacaa
cgtcgtggtggtaaaggcaaagcagcaacctcaatgaaagatgaagatttcattgagcat
ctgtttatcgccaatacccatgacactctattgtgtttctccagtactggtaaggtttac
tggaaaaaagtttatgagttaccacaaggtggccgtacggcccgtggtaaacctattgtg
aatctgttaccgctggaagaaaacgagcgtattaacgcggtcttgccaattcgtgagttt
gaagccgataaatttatctttatggcaacggccagcggtacagtgaagaaaaccccatta
gttgattattctcgtccgcgtgccaacggtattattgctgtggatctgaaagaagatgac
aaactggtgggtgtggcgttaaccgatggtctatcggatgtcatgctgttcagcagcaac
ggaaaagtcattcgtttccctgaaacggatgtgcgctcaatgggccgtgtttcacgcggt
gttcgtggtatgcgtctggccgatggtgaacagattatttcgttgattatcgcgcagcag
gaaggagcgattctgacggcgactgaatttggttatggtaaacggacgaatctcgaagaa
taccgcgttcaaggtcgtggtggtcagggcattatttctattcagacttctgcccgaaat
ggtcatgtcgtcggtgcggtacaggttcgtgaagaagatcagatcatgttaattaccaat
ggtggaacactggttcgcactccggtgaaacatgtctcattggttggtcgtaatacacaa
ggtgtacgcctgatcaatctgagtaatgatgaaaaactggtcggtcttgagcgcgtcatc
gaagatgaggatgaagaggtcgatattgaaaatctgccacatactgatgatctaacggaa
gaataa
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