Methylophaga pinxianii: LGT42_009965
Help
Entry
LGT42_009965 CDS
T08312
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
mpin
Methylophaga pinxianii
Pathway
mpin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGT42_009965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpin02000
]
LGT42_009965
02044 Secretion system [BR:
mpin02044
]
LGT42_009965
Transporters [BR:
mpin02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LGT42_009965
Secretion system [BR:
mpin02044
]
Type I secretion system
Multiple protein transporter
LGT42_009965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_30
RsgA_GTPase
nSTAND3
AAA_18
NACHT
PhoH
AAA_29
AAA
AAA_33
REC114-like
AAA_22
Mg_chelatase
nSTAND1
DUF325
HlyD_D4
DUF6724
DUF1056
Motif
Other DBs
NCBI-ProteinID:
UPH44837
LinkDB
All DBs
Position
complement(2068737..2070464)
Genome browser
AA seq
575 aa
AA seq
DB search
MKQPLKTAKNEIAEALLAFKSVFITVGLFSAILNLLMLVPSLYMLQVYDRVLSSRNEATL
LMLTLIVVGAYLILGGLEYVRSFVLIRVSSKLDTVLNKRVYTAAFEQSLKSKGTNAGQSL
QDLTTIRQFVGGNGLFAFFDAPWFPIYILIIFLFDTSLGLFALAGSIVLILLAVISEVIS
RKPLSEANTIAVKANNLATNNLRNAEAIEAMGMLDNLMGRWYRLQQQYLALQSEASDKAA
SIGAMSRFIRISLQSLVLGLGALLVLENKITPGMMIVASILMGRVLSPVEQLISVGKTWN
ATKSAYSRLKELLVANPAREAGMELPEPIGLVSVEGITALPPGAQTAALKNVSFALEPGD
ILGVIGPSGAGKSTLARILVGVWPTRAGQVRLDAVDIFQWNKQELGPHIGYLPQTIELFA
GTVSENIARFGEVDANKVISAAKQAGVHEMILRLPDGYDTLLGDDGAGLSGGQKQRLGLA
RAIYNEPALIVLDEPNSNLDEIGEKALAETIKQLQKQRKTIVMITHRSSALAVSNKLLLL
VDGTVQLFGPTTNVMKTIAQKNKENQPRPRASAVA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcctttaaaaacagcaaaaaatgaaatcgccgaagccttattagcctttaaa
tcggtgtttatcactgtggggcttttcagtgcgattttgaatctgctgatgctggtgcca
tcactgtacatgctacaggtgtatgaccgggtattaagcagccgcaatgaagccactttg
ttaatgctcacccttattgtagtgggcgcgtacctcattttaggtggtttggaatatgta
cggagctttgtgctgattcgcgtgtcgtcaaaactcgatacggtgttaaacaaacgggtt
tataccgcggcgtttgaacaaagcctgaaaagcaaaggcaccaacgctggacagtcatta
caggatctcaccaccatcaggcaatttgttggtggtaatggtttgtttgccttttttgat
gcgccctggtttcccatctacatactgattattttcctatttgacacatcgctggggctg
tttgcattagccggttcaattgtattgatcttattagccgtcatcagtgaagttatttcc
agaaagccgctatctgaagccaataccattgcggtaaaagccaataacctcgctaccaat
aatctacgtaacgccgaagcgattgaggcgatgggcatgctggataatctgatgggccgt
tggtatcgattgcagcaacaatatttagcattgcaaagtgaagccagtgataaagcggcc
tcaattggggcgatgagccgttttatccgtatcagtctccagtcattggtgttgggcctg
ggtgcgttgctggttttggaaaacaaaattacccccggcatgatgattgtcgcctcaata
ttaatgggccgtgttttgagcccggtcgaacaattaatcagtgtcggcaagacttggaat
gccaccaagagtgcttattcccggctgaaggaattgctggttgctaacccagctcgtgaa
gccggtatggaattgccagaacctataggattggtgtcggtggaaggtattactgcgctg
cctcccggtgctcaaacagcggccttaaaaaatgtcagctttgcactggaacccggtgat
attctcggtgttattgggccaagtggtgcgggtaagtcgacgcttgcgaggattctggtt
ggggtatggcctacccgagcgggccaggttcgattggatgcagtcgatattttccagtgg
aacaaacaagagctggggccacatattggttacctgccgcagacgattgaactgtttgcc
ggcacggtcagtgaaaatattgcccggtttggtgaagtggatgccaacaaagtgatatct
gcagccaagcaggccggagttcatgaaatgatcctccggctgccagatggttatgacacc
ttgctcggcgacgatggtgcagggctttcaggtggacaaaaacaacgtttgggattagca
cgagccatctacaacgaacccgctttaattgtgttggatgaacccaattcaaatctggat
gaaatcggcgaaaaagccctcgccgagacaattaaacaacttcaaaaacaacgaaaaacc
attgtcatgatcactcatcgatccagtgcattggcagtcagtaacaaactcttgctgtta
gtcgatggcacagttcagttatttggtcctacaaccaatgtgatgaaaaccatcgctcag
aaaaataaagaaaatcaacccagacctcgagcctctgccgttgcataa
DBGET
integrated database retrieval system
