Methylophaga pinxianii: LGT42_010045
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Entry
LGT42_010045 CDS
T08312
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mpin
Methylophaga pinxianii
Pathway
mpin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGT42_010045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpin03021
]
LGT42_010045
Transcription machinery [BR:
mpin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGT42_010045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_11
PhyR_sigma-like
HTH_23
HTH_24
DUF6362
Sigma70_ECF
Rv2175c_wHTH
HTH_31
HTH_3
GerE
HTH_7
HTH_40
HTH_29
HTH_17
Fe_dep_repress
MerR
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UPH47127
LinkDB
All DBs
Position
complement(2087769..2088275)
Genome browser
AA seq
168 aa
AA seq
DB search
MNTITQTKNSLITELYQTHNSWLMGWLCKKLGCSFDAADLMQDTFSRVLQKDDLSNIKEP
RAYLTTIAHGLMVNHVRRRDIEAAYLDEIANLPQAEAPSPETINIMIETLTKIDEMLDGL
PSKIRNAFLWFQLEGLSHAQIAERLSVSVSSVRQYIAKALLHCITMTA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtgaatactattactcaaacaaaaaattcactgattacagaactgtatcaaacacataac
agctggctaatgggctggctttgtaaaaagctgggttgtagttttgatgccgccgatctg
atgcaagatactttctcccgtgtcctgcaaaaagatgatctgagcaatatcaaagaacct
agagcttacctcaccaccatcgcccatggcttaatggtgaatcatgtcagacgtcgtgat
attgaagcggcctatcttgatgaaattgcaaacttgcctcaggcagaagcgccttcaccc
gaaaccatcaatatcatgattgaaaccctgaccaaaattgatgagatgctcgatgggttg
ccaagcaaaattcgtaatgcgtttttatggtttcagttagaaggtttaagccatgcccaa
atcgcagaaagattatcggtttctgtcagttctgttcgtcaatacattgccaaggcctta
ttacactgcattaccatgacggcttag
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integrated database retrieval system
