Methylophaga pinxianii: LGT42_010315
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Entry
LGT42_010315 CDS
T08312
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpin03009
]
LGT42_010315 (rimO)
Enzymes [BR:
mpin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LGT42_010315 (rimO)
Ribosome biogenesis [BR:
mpin03009
]
Prokaryotic type
ribosomal protein modification factors
LGT42_010315 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UPH44906
LinkDB
All DBs
Position
2142781..2144091
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AA seq
436 aa
AA seq
DB search
MKAPQVGFVSLGCPKALVDSERIITKLRSEGYAISANYDDADLVVVNTCGFIDSAVEESL
ESIGEAIAHNGKVIVTGCLGSRDNTIRERHPQVLEITGAHALEEVVGAVHKHLPQPHDPF
ISLVPPEGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVNQVIAEAKRLADAG
VKEILVISQDTSAYGVDLKYAEYEWQGEKIATRFTSMAKALGELGIWVRMHYVYPYPHVD
DVIPLMAQGKILPYLDIPFQHASPRILKLMKRPASSQNNLERIQAWRAICPDITLRSTFI
VGFPGETEAEFEELLDFLDKAQLDKAGAFKYSPVDGAVANQLPDPVPEEIKEQRLARFMA
KQAEISAHRLQLKVGKRDFVIIDEVVEEGAVGRSRADAPEIDGQVFIDHATHLNVGDIVE
VEFEEADEHDLWARLV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccacaggtcggatttgtcagtctcggttgccccaaagcgctggttgatagt
gaacgcattatcaccaagctgcgttcagagggatatgcgatttcggcaaactacgatgac
gctgatctggtcgtggtaaatacttgtggttttattgattctgctgtcgaagaatcattg
gaaagtatcggtgaagccattgcgcataatggcaaagtgattgtgacaggctgtctgggt
agtcgcgataatacgattcgtgaacggcatcctcaggtactggaaattaccggtgcgcat
gcgctggaagaagtcgttggcgcggtacacaaacatttacctcaaccacatgaccccttc
atcagcctggtcccacccgagggcatcaaattgacgccccgtcattatgcctatctaaag
atctcagaaggctgtaaccatcgctgtactttttgcattattccatcaatgcgtggtgat
ttagtcagtcgcccggttaatcaggttattgctgaagccaagcgtcttgcggatgctggg
gtaaaggaaattctggtcatttcccaggataccagtgcctacggcgtcgatttgaaatac
gctgaatatgaatggcaaggtgaaaaaattgccactcgctttacgtcaatggctaaagca
ctaggtgagctcggcatctgggtgcgaatgcattatgtatatccctatccccatgtcgat
gatgtgattccattaatggcgcaaggtaagattttgccttatctggatattccgtttcag
catgcaagtccgcgtattttaaaattaatgaaacgaccggcctcatcgcaaaataatctt
gagcgtatccaggcgtggcgggctatttgtcctgatatcactttacgcagtacttttatc
gttgggtttccgggtgaaaccgaagccgaatttgaagagctgctggattttctcgataag
gcgcagctggataaggccggcgcatttaaatattcacccgttgatggtgccgttgccaac
cagctaccggatccggttccggaagaaattaaagaacagcgtctggcacgatttatggcc
aaacaggctgaaatcagcgctcatcgtctgcagctaaaagtcggtaaacgcgattttgtc
attattgatgaagtggttgaagaaggtgcagtgggacggagtcgagctgatgcaccggag
atcgacggtcaggtatttattgatcatgcaacacacttaaatgtgggcgatattgttgag
gtggaatttgaagaagccgatgagcacgatctctgggctcgattagtttag
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