Methylophaga pinxianii: LGT42_010330
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Entry
LGT42_010330 CDS
T08312
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpin03400
]
LGT42_010330
Enzymes [BR:
mpin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LGT42_010330
DNA repair and recombination proteins [BR:
mpin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LGT42_010330
Prokaryotic type
LGT42_010330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UPH44909
LinkDB
All DBs
Position
complement(2146428..2147894)
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AA seq
488 aa
AA seq
DB search
MMRQVINVVWFKRDLRLSDHAALTAACEQPLPILMLYIVEPSLVKDQHYSLRHWRFVWQS
LQQLNQQLSPHKGKVLVIEGEAVDVFEQIQQQYQIDTIFSHQEIGLNITFARDKTLHKTF
KQQHIIWTEFPHGGVIRAANTREDWDKHWQQVMREPILESQWQQSEFITDLHQVDFTPPV
EWQQSDILFQYGGELTAQNVLADFFAQRGKLYNRHISSPDLSRQSCSRMSPYLAWGNISL
RQVYQQLLAHWNDIGWRRALTAFASRLHWHCHFMQKFESETEMEFRAVNRGYQDFPWRED
KQAEFDLLAWQRGRTGFPLVDASMRCLIATGYINFRMRAMLVSFLCHQLHIDWRRGAHYL
AQLFLDFEPGIHYPQLQMQAGVTGTNTIRIYNPTKQAEEQDSEGKFIREWLPELSELADE
IIHRPWEITPMESIMLNFELGHDYPYPIVDIKTASKYSRDLLWSWRERNDVKNENQRILS
RHVRLTSR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtcaggtcattaatgttgtctggtttaaacgcgatttacgtttatcagaccat
gctgcgttgactgctgcctgtgagcagcctctgccaattttgatgctttatatcgttgag
ccgtctctggtaaaagatcagcattacagtttgcgtcattggcggttcgtctggcagtcg
ttacaacaattgaatcagcaattatcgccacacaagggcaaagtgctggtgattgaaggt
gaagctgtagacgtctttgagcaaatacagcaacagtatcagattgacacgattttcagt
catcaggaaatcggactgaatatcacatttgcacgcgataaaacccttcataaaacgttt
aaacagcagcacattatctggactgaatttccacatggcggggtgattcgcgcagcaaat
actcgtgaagattgggataagcattggcaacaggttatgcgagaaccaatactcgaaagc
caatggcaacagtcagagtttattactgatctacaccaagtcgatttcacgccgccagtg
gaatggcagcaaagcgacatactttttcaatatggcggcgagttaacggcgcaaaatgtg
ttagcagatttctttgcccagcgaggcaaactctataatcgacatatttccagtccggat
ctgagtcgtcagtcctgttcccgtatgtcgccttatcttgcatggggtaatatcagtctg
agacaggtctatcaacagctattagcccactggaatgatataggatggcgcagagcattg
actgccttcgcgtcaagactgcactggcattgccattttatgcagaaatttgaaagtgaa
acggaaatggagtttcgtgcagtcaatcggggttatcaagactttccctggcgcgaagat
aaacaggcggaatttgatttgctggcctggcaacggggaagaaccggatttccattagtg
gatgccagtatgcgctgtttgattgcgaccggttatatcaattttcggatgcgcgccatg
ctggtcagtttcctttgtcaccagttacatatcgattggcgacgcggagcccactattta
gcgcaattatttctggattttgaacccgggattcattatccgcaattacagatgcaggca
ggtgttacgggaacaaacacaatccgaatatataatcctaccaagcaggcggaagagcag
gatagtgaaggcaaatttatacgtgaatggctacccgagttgagcgaattagcggatgag
attatccatcggccatgggaaatcacaccgatggaatccatcatgctcaattttgaattg
ggccacgattatccttatccaattgtggatattaaaacggcttcaaagtatagtcgcgac
cttttatggtcatggcgcgaacgcaatgatgtaaaaaatgaaaatcaacgtatattaagt
cgacatgtgagattaaccagtcgataa
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