Methylophaga pinxianii: LGT42_011670
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Entry
LGT42_011670 CDS
T08312
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mpin
Methylophaga pinxianii
Pathway
mpin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGT42_011670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mpin02022
]
LGT42_011670
02035 Bacterial motility proteins [BR:
mpin02035
]
LGT42_011670
Two-component system [BR:
mpin02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LGT42_011670
Bacterial motility proteins [BR:
mpin02035
]
Pilus system
Twitching motility proteins
LGT42_011670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_19
AAA_16
HTH_30
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
UPH45164
LinkDB
All DBs
Position
complement(2444099..2445451)
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AA seq
450 aa
AA seq
DB search
MNPQALIVDDEPDILDLLSMTLSGMSIDCVTAESIAEAERILSQQSFDLCFTDMRLPDGD
GLQLVKSIQLSHPELPVAVITAYGNMDLAVTALKSGAFDFVSKPLKLRVLRELVEAALKL
SPNRSHKNDRRSRDRLLGETNLMRELRGKVAKLARSQAPVYISGESGTGKELVARLIHDL
GARSDKAFVPVNCGAIPNELVESEFFGHKKGAFTGAVADKQGLFQHAHGGTLFLDEVADL
PLMMQVKLLRAIQEKAIRPVGGHEEINIDVRILSATHKNLAECVEKGIFRQDLFYRLNVI
ELQVPPLRERKADIPLLTEHILQKFAGKTHTVPVQLTDEAMTVLQQYPFPGNVRELENTL
ERALTWAEGTKITLTDLMLPTIAPTKNTASLMPVATHELNQDLESHLEEQERAIIEKALT
ETRWNKTAAAKRLGITFRALRYKLKKLDLE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacaagcgttgattgtcgatgatgaaccggacattcttgatttactgtcgatg
accttatccggcatgtcaattgactgtgttaccgctgaaagtattgccgaagctgaacgg
attttatctcagcaatcctttgatctgtgttttaccgatatgcgtttaccggatggagat
ggcttgcagctagtgaagagtattcagctaagccatccggagttacctgtggctgttatt
actgcgtatggcaatatggatttggcggtgactgcactgaaatcaggggcctttgacttt
gtctccaagcccttaaaattacgtgttttacgtgagttggtggaagctgccttaaagtta
tcaccaaaccgatcacataaaaatgaccgtcgatctcgtgatcggttattaggtgaaacc
aacttgatgcgcgagttgcgaggcaaagtagccaagctggcccgtagtcaggctccggtg
tatatcagtggtgaatccggcacaggtaaggaattggtggcgcgtttaatccatgatttg
ggggcacgatcagataaagcttttgtgccggtgaactgcggtgcgattccaaatgagtta
gttgaaagcgaatttttcggtcacaaaaaaggcgcttttaccggtgcagttgctgataaa
cagggattatttcagcatgcgcatggtggaacattatttttggatgaagtcgctgattta
ccgctgatgatgcaagttaaattattacgtgctattcaggaaaaagccattcgtcccgtc
ggtggtcatgaagaaatcaatattgatgtcaggattttatcggccacccacaaaaatctg
gcggaatgtgttgagaaaggaatattccgccaggatttgttttaccggctgaatgtgatc
gaattgcaggttcctccgttaagagagcgaaaagcagatattcctctattaacagaacat
atcctgcaaaaattcgcgggtaaaacgcatactgtcccggttcaattaaccgatgaggcg
atgacggtattacaacaatatccatttcctggaaatgtccgcgaattggaaaataccctt
gaacgagctctgacatgggctgaaggcactaaaatcacattgacagatttgatgttgcca
acaattgcaccaaccaaaaatactgcctcgctcatgcctgtggctacccacgagttaaac
caggatctggaaagtcatctcgaagaacaggaacgggccattattgaaaaggcactcacg
gaaacccgctggaataaaacagccgcagctaaacgcctgggtattacttttcgtgcatta
cgttacaagctaaaaaaactggatctcgaatag
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