Methylophaga pinxianii: LGT42_011810
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Entry
LGT42_011810 CDS
T08312
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpin03032
]
LGT42_011810
03036 Chromosome and associated proteins [BR:
mpin03036
]
LGT42_011810
03400 DNA repair and recombination proteins [BR:
mpin03400
]
LGT42_011810
DNA replication proteins [BR:
mpin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LGT42_011810
Chromosome and associated proteins [BR:
mpin03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LGT42_011810
DNA repair and recombination proteins [BR:
mpin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LGT42_011810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
UPH45188
LinkDB
All DBs
Position
complement(2472428..2472718)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSDLIEILSEKQSLLNYRDVELAVKLILEQMSDCLSRGDRIEIRGFGSFTLHHRPPRV
GRNPKSGESVKLDEKYVPHFKPGKELRDRVNNAAGF
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgatttgatagaaatactatccgaaaaacaatctctattaaattaccga
gacgttgaactagcggtaaagttaattcttgaacagatgagtgattgtctgtcacgtggt
gaccgtattgaaatcagagggtttggtagtttcaccttacatcatcgtccaccaagagtg
ggacgtaatccaaaaagtggtgaatccgttaaacttgatgaaaaatatgtaccacatttt
aaacccgggaaagaattacgcgatcgcgttaacaatgccgcaggtttttaa
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integrated database retrieval system
