Methylophaga pinxianii: LGT42_011815
Help
Entry
LGT42_011815 CDS
T08312
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
mpin
Methylophaga pinxianii
Pathway
mpin03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LGT42_011815 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mpin03011
]
LGT42_011815 (rpsA)
Ribosome [BR:
mpin03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LGT42_011815 (rpsA)
Bacteria
LGT42_011815 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
CobW_C
OB_ChsH2_C
Motif
Other DBs
NCBI-ProteinID:
UPH45189
LinkDB
All DBs
Position
complement(2472832..2474505)
Genome browser
AA seq
557 aa
AA seq
DB search
MSESFADLFEESLNATPMQPGKIVTGTVVNVGPDVVMVNAGLKSEGAIPVAEFMNEKGEI
TVSVGDLVDVSLETLEDGFGATQLSREKAKAAEAWIRLEHAFEANETVLGIISGKVKGGF
TVDLENIRAFLPGSLVDVRPIRDTSHLEGKELEFKLIKLDRPRNNIVVSRRAIMEAENSV
EREALLETLEEGKVVKGIVKNLTDYGAFVDLGGIDGLLHITDMAWKRVKHPSEVVAIGDE
IDVQVLKFDKERERVSLGLKQLGDDPWKDIARRYPNSTRIQGKVTNIADYGCFVEIEDGV
EGLVHMSEMDWTNKNVHPSKLVTLGDEVEVMVLDIDAERRRISLGIKQCQTNPWEEFSMT
HNKGDKVSGAIKSITDFGIFIGLDGGIDGLIHLSDISWEEENEELIRDFKKGDEVEAVVL
AIDPERERISLGIKQLQDDPFSAYLSEHPRGTVVTGKVTAVDAKGATVELAEGVEGYVRV
ADISRERIEDASKVLNIGDEVEAKFTGMSRKDRTLTLSIKAKDDQEESEAVKEYSNVSSG
NTTLGDLLKEQMNQKDS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgctgatctctttgaagagagtctaaacgcaaccccaatgcaacca
ggcaaaattgttaccggtacggtagtcaatgtcggtcctgatgttgttatggttaatgca
ggtctgaaatctgaaggcgctatcccggttgccgaattcatgaacgaaaaaggtgaaatc
accgtttctgttggtgatttggtcgatgtttctctggaaacactcgaagacggatttggt
gcgacacaattatcccgtgaaaaagccaaagcggctgaagcatggatcagattggaacac
gcatttgaagccaacgaaaccgttctggggattatctctggtaaagtcaaaggtggtttc
actgttgatctggaaaacattcgtgctttcctgccaggttcactggttgatgtacgccct
attcgtgatacttcacacctcgaaggcaaagagcttgagttcaaactaattaagctggat
cgcccacgcaataatatcgtagtttctcgccgtgccattatggaagctgagaacagtgtt
gaacgcgaagcacttctggaaacactggaagaaggcaaagtggttaaaggtatcgttaag
aacctgacagattacggcgcgtttgttgaccttggtggtattgatggtctgttgcatatc
actgatatggcttggaaacgtgttaaacatccttcagaagtcgttgctatcggtgatgaa
atcgatgttcaggttctgaagtttgataaagaacgtgaacgtgtatcgttaggcctgaaa
cagctgggtgatgatccatggaaagatatcgcgcgccgttatccaaacagcactcgtatc
caaggtaaagttaccaacatcgcagattacggttgctttgttgaaatcgaagatggcgtt
gaaggtctggttcatatgtccgaaatggactggaccaacaaaaacgttcacccatccaag
ctggttactttgggtgacgaagttgaagtgatggttctggatattgacgctgaacgtcgt
cgtatctcactgggtattaaacagtgccagaccaacccatgggaagagttctcaatgact
cataataaaggtgacaaagtcagcggtgctatcaaatccatcactgatttcggtatcttc
attggtctggacggtggcattgacggtctgattcacttgtcagatatctcatgggaagaa
gaaaacgaagaattgattcgtgacttcaaaaaaggcgatgaagttgaagccgttgtattg
gctatcgaccctgagcgtgaacgcatttccctgggtatcaaacaattgcaggatgaccca
ttctcagcttatttgtctgaacacccacgtggtacggttgtgaccggtaaagtcacagca
gtggatgctaaaggtgcaacagtagaattggctgaaggtgttgaaggctatgtccgtgtg
gcagatatctcacgtgaacgcattgaagatgcgagcaaggtgttgaatatcggagatgaa
gtggaagctaaattcactggaatgtcccgcaaggatcgcacgctgactttgtcgatcaaa
gcgaaagatgatcaagaagaatctgaagcagtgaaagagtacagcaatgttagttccggc
aataccactttaggtgatttgctgaaagaacaaatgaatcagaaagacagttaa
DBGET
integrated database retrieval system
