Methylophaga pinxianii: LGT42_012680
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Entry
LGT42_012680 CDS
T08312
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
mpin
Methylophaga pinxianii
Pathway
mpin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGT42_012680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpin02000
]
LGT42_012680
02044 Secretion system [BR:
mpin02044
]
LGT42_012680
Transporters [BR:
mpin02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LGT42_012680
Secretion system [BR:
mpin02044
]
Type I secretion system
Adhesin protein transporter
LGT42_012680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
Zeta_toxin
AAA_21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UPH45357
LinkDB
All DBs
Position
complement(2638955..2641135)
Genome browser
AA seq
726 aa
AA seq
DB search
MEYQATNEQLQNRQWKADAAYLTHDDPLLACLTVLTKLLHKPHSPDSMVAGLPLVDNRLT
PDLFARAAERAGLASKVVKRPLHKISPLVLPAVLLLNDGNACILLKVKEKQATVIYPEAG
DGESLIDVSELQEHYTGYAIFIKAVQHFDKRGEPSTIPRAKHWFWGTLSRFWPIYSEVFV
ASILVNLFAIASPLFVMNVYDRVVPNNALATLWVLAIGLAIVFIFDLLLRTLRGYFIDVA
GKKADVILSATIFEKVLGIKMAARPNSVGSFANSMQEFESFRDFFTSATLATLIDLPFTF
LFIAVIWMIAGDLAYIPLVVIPITIVISLIIQIPLGRAIKQLFRHAGQKSATLIETLTGL
ETIKSLGAETPLQRKWEQTAGSISKYSQRAKLLSSAAVNLTSFVQQMTTIAVVVYGVYKI
SENEISMGALIASTILAGRALAPMSQLAGILTRFHHSKAALASLNNMMNLPVERPNGREF
LHRDKFKGGIEFKQVSFRYPEQAIEALTDVSFKLNAGEKIAIIGRIGSGKSSIEKLILGL
YEPAEGAVLLDETDLRQIDPIDLRRSVGYVPQDVMLFYGSVRDNIALGAPFADDAAILRA
AEIAGVTDFINRHPSGFDMPVGERGEGLSGGQRQSISVARALLLDPPVLVLDEPTNAMDN
SSEERFKSKLGEIIKDKTLILVTHRASLLSLVDRVLVMDQGKLVADGPREQILAALKSGH
IRVSKG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaagcaaccaatgaacagttacaaaatcggcaatggaaagcagatgctgcc
tacctgactcatgatgatccgttattagcttgtctgacggttcttacaaaattactccat
aaaccacatagccctgattccatggtggccggcctgcctttggtagataaccgtcttact
ccagacttatttgccagagccgctgagcgagcagggctggcgtcaaaagtagttaaacgt
ccgctacacaaaatttctcctcttgtgctgcctgcagtcttattactgaatgatggtaat
gcctgtatcttacttaaggttaaggagaagcaagcgaccgtgatatatccggaagcgggt
gatggcgagtccttgattgatgtgtctgaacttcaggaacattacacgggttatgctatt
tttatcaaagccgttcaacactttgataaacgtggagagccgtccaccattccccgagcc
aaacattggttttgggggacattgtcacgcttctggccgatctatagtgaggtgtttgtc
gcctcaattctagtcaatctgtttgccatcgcttcacccctgtttgtgatgaatgtctat
gatcgggttgtgcccaataatgccttggcgactttgtgggtgttggcgataggcttggcc
atcgtctttatctttgatttattactgcgaaccttgcgcggctattttattgatgtcgcg
gggaaaaaagcggatgttattttatctgcgaccatctttgaaaaagtattgggtattaaa
atggcagcccgaccaaactcggtcggaagctttgccaacagcatgcaagaatttgagtca
tttagagatttttttacctcagctacgctggcaacactaattgatttaccgtttaccttt
ttattcattgccgttatctggatgattgccggtgatttggcctatattcctctagttgtc
attccgataacgatagtcataagtttaattattcaaatcccgcttggccgggcaataaaa
cagctgtttcgccatgcggggcaaaaaagtgccacgcttattgaaacgctaaccggactg
gagaccatcaaaagtctgggcgctgaaaccccattgcagcgcaaatgggagcaaacagcc
ggttccatctccaaatacagtcagcgtgcaaaactgctttcttcagccgcggtgaattta
accagttttgttcaacaaatgaccaccattgcagtggtggtgtatggcgtatacaaaatc
agtgaaaatgaaatcagtatgggggcattaattgccagtactattctggcaggccgggcc
ttggcaccgatgagccaattggctgggattttgacacgtttccatcattctaaagcggcg
ttagcttcattaaataatatgatgaatttacccgtagagcgtcccaatggccgcgaattt
ttacatcgcgataaattcaaaggcggcattgagttcaaacaagtcagttttcgctatcca
gaacaagctatcgaagcattaacagatgtttccttcaaacttaatgcgggcgaaaaaata
gctataatcggacgaatcggatcaggcaaaagctcgattgaaaagttaatccttggatta
tatgagcctgcagaaggagccgtcttgttggatgaaacggatcttagacagattgatcca
atcgatttacgacgctcagtcggctatgtacctcaagatgtcatgctgttttatggcagt
gtgcgagataatattgctttaggagcaccatttgcagatgatgctgcgatattgcgtgca
gcagaaatcgctggggtaacagattttatcaatcgacatccttctggctttgatatgcct
gtgggtgagcgtggggaaggtttatctggtggacaacgtcagagcatttcagtagcgcga
gctttattactggatccacccgttctggttttggacgagccgaccaatgcgatggataac
agcagtgaagaacgcttcaaaagtaaactcggggaaatcatcaaagataaaacacttatt
ttggtgacgcaccgggcatctttgttaagtttagtggatcgtgttttagtgatggaccaa
ggaaaactcgtggctgatggaccacgtgagcaaattctggcggcactgaaaagtggacat
atccgggtttcgaaagggtaa
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