KEGG   Methylophaga pinxianii: LGT42_013180
Entry
LGT42_013180      CDS       T08312                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
mpin  Methylophaga pinxianii
Pathway
mpin00470  D-Amino acid metabolism
mpin00550  Peptidoglycan biosynthesis
mpin01100  Metabolic pathways
mpin01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:mpin00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LGT42_013180
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LGT42_013180
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    LGT42_013180
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mpin01011]
    LGT42_013180
Enzymes [BR:mpin01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     LGT42_013180
Peptidoglycan biosynthesis and degradation proteins [BR:mpin01011]
 Precursor biosynthesis
  Amino acid ligase
   LGT42_013180
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_4 ATP-grasp_3 CPSase_L_D2 RimK GARS_A ATPgrasp_YheCD
Other DBs
NCBI-ProteinID: UPH45453
LinkDB
Position
complement(2751215..2752153)
AA seq 312 aa
MSELAFNANSFGRVAVLLGGRSAEREISLKSGHAVLAALQSLGVDAVELDVDKNVSEHLR
QNNFDRAFIVLHGRGGEDGEIQGVLQSLQLPYTGSGITGAVLSMNKRLSKQVWESQGLPT
PKYMRLTRQSSPAQLVAELGLPIVIKPVNEGSSIGMSKVTSAETLEQAINLAFDYDDEVI
AEQWIHGAEYTVSILNGEALPVIRLTTPRDFYDFEAKYLADSTEYLCPCGLSDADEKRCQ
QLAINAFNALNMSGWGRIDVMADQQGNFYLLEANSVPGMTDHSLVPMAARQAGISFENLV
AQVLQSSFEDKR
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagcgaattagcatttaatgcaaacagttttggtcgagttgcagtgctgcttggaggc
cgttctgcagaacgtgaaatttcactgaaaagtggtcatgcggttttagctgctttgcag
tcgcttggcgtggatgctgttgagttagacgtcgacaaaaatgtaagtgagcatttacgt
cagaataactttgatcgggcatttattgtcctgcatggacgtggtggtgaggatggggaa
atccagggtgttctgcagtcgttgcaactgccttataccggcagtggcattaccggtgca
gtattgtcgatgaataaacgattaagtaaacaggtctgggaaagtcaggggttaccaaca
cctaaatatatgcgtttaacccgccagtccagcccggcacaacttgttgcagagttagga
ttgccaatagtcatcaaaccggtaaatgaaggttcaagtattggcatgagcaaggtgact
tctgccgagacgttggaacaagccattaatcttgcttttgactatgacgatgaggttatt
gcagagcaatggattcatggtgcggaatacacggtaagcattttgaatggtgaggcattg
cccgttattcgcttgaccacgccaagagatttttatgattttgaagcgaaatacttggct
gattctactgagtacttatgtccatgtggcttaagtgatgccgatgaaaaacgttgtcag
caattggcaatcaatgctttcaatgcactcaatatgtcggggtggggccgtatcgatgta
atggccgatcaacaaggcaacttttatttgcttgaagcgaatagcgttcccggtatgacg
gaccacagcctggtgccaatggcagcaagacaggctgggatcagttttgaaaatctggtt
gcacaagtactgcaaagcagttttgaggataaacgctga

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