Methylophaga pinxianii: LGT42_013975
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Entry
LGT42_013975 CDS
T08312
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
mpin
Methylophaga pinxianii
Pathway
mpin02020
Two-component system
mpin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGT42_013975
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LGT42_013975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mpin02022
]
LGT42_013975
02035 Bacterial motility proteins [BR:
mpin02035
]
LGT42_013975
Two-component system [BR:
mpin02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
LGT42_013975
Bacterial motility proteins [BR:
mpin02035
]
Flagellar system
Flagellar assembly proteins
Others
LGT42_013975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_28
HTH_30
AAA
AAA_16
AAA_2
MCM
HTH_23
CggR_N
HTH_11
AAA_PrkA
AAA_3
Sigma70_r4_2
HTH_29
Mg_chelatase
HTH_24
AAA_19
AAA_7
DUF2089
HTH_50
FleQ
PaaX
nSTAND3
MerR
Motif
Other DBs
NCBI-ProteinID:
UPH45595
LinkDB
All DBs
Position
complement(2892009..2893394)
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AA seq
461 aa
AA seq
DB search
MTQSMIMVVEDDANLRIALCDTLELAGYKVTATDHGQKALDKLANEPIGLLLSDLQMQPM
DGHTLLKKARAMLPSLPVVLMTAYGSVQSAVEAMHEGACDYLMKPFEADDLLQRVQRYVR
MLPVSDDMVAAAKSSVDLQALARRVADTDATVLINGESGTGKEVLARFIHRHSPRKDGPF
VAINCAAIPESMLEATLFGYEKGAFTGAAQAYAGKFEQANQGTILLDEITEMDISLQAKL
LRVLQEREVERLGGRKTLSLDVRVLATTNRTLRDEVKAGRFREDLFYRLNVFPLQLLPLR
ERPEDIVPLARQLLERHCQHSGRVAPHFDSEAQLKLAQHSWRGNVRELDNVIQRALILQS
GSLIKAEDLAYEATTATPSNDAPAQSSQIPLQHDSIVADDNSDDLRSHEQRHILDVLAKH
RGSRRETAKELGISERTLRYKISRFREQGVAIPGKFGKKSA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatcaatgattatggtggtagaagatgatgccaacttacgcattgcgttgtgt
gacaccttagagttagctggatacaaagtcaccgcaacggatcacggtcagaaagccctc
gacaagctggctaatgaaccgattggattattgctcagtgatttacagatgcaaccaatg
gatgggcataccttattgaaaaaagcacgagcaatgttgccttctttacccgttgtgttg
atgacagcttatggttcagtacaaagtgctgtagaagccatgcatgaaggggcttgtgac
tacttaatgaaaccttttgaagcggatgatttattacaacgagtacagcgatatgtccgt
atgttacctgtcagtgatgatatggttgctgccgcaaaatcatctgttgatttacaggca
ttagcacgacgagttgctgataccgatgcaacggttttgattaatggggagagtggtacc
ggtaaagaagtactggcaagatttattcaccgccattcaccccgtaaagatggacccttt
gtggcgattaactgtgcggccataccagagtcaatgctggaagccactttatttggctat
gaaaaaggtgctttcactggtgctgcacaagcctatgcgggtaagtttgaacaggctaac
cagggaaccatattgctggatgagataaccgaaatggatatttccttacaggcaaaatta
ctacgcgtacttcaagagcgtgaagtggaacgtctgggtggcagaaaaactttgtcgttg
gatgtccgcgtactggcaactacgaaccgcacgttacgagatgaagtaaaagccggtcgc
ttcagagaagatttattttatcgtttgaacgttttcccactgcaattactgccgctacgg
gaaagaccagaggatattgtgccattagcccggcagttgctagaaaggcattgccagcat
agtggccgggtagcgccacattttgatagcgaggcacaactcaaattggctcaacatagc
tggcgtggcaatgtccgagaattggacaatgtgattcagcgagcgttaattttgcaaagc
ggctcgctgatcaaggcggaagatctggcttatgaagccacaactgcaacaccatcaaat
gatgctccggctcaatcgtcacagattccgttacagcatgacagtatcgtggcggatgat
aatagcgatgacctgcgtagtcatgaacagcgtcatattctcgacgtacttgccaaacat
cgtggtagtcgccgagaaacagcaaaagaattagggatcagtgagcgtaccttacgttac
aaaatctcacggtttagggaacagggtgtggctatccccggaaaatttggcaagaagtct
gcataa
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