Methylophaga pinxianii: LGT42_013985
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Entry
LGT42_013985 CDS
T08312
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
mpin
Methylophaga pinxianii
Pathway
mpin02020
Two-component system
mpin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGT42_013985
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LGT42_013985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpin03000
]
LGT42_013985
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mpin02035
]
LGT42_013985
Transcription factors [BR:
mpin03000
]
Prokaryotic type
Helix-turn-helix
Other families
LGT42_013985
Bacterial motility proteins [BR:
mpin02035
]
Flagellar system
Flagellar assembly proteins
Others
LGT42_013985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_50
bpMoxR
AAA_2
AAA_7
AAA
IIGP
DUF2112
Motif
Other DBs
NCBI-ProteinID:
UPH45597
LinkDB
All DBs
Position
complement(2894702..2896189)
Genome browser
AA seq
495 aa
AA seq
DB search
MNVCNILVIDIEPQRRETLSTLIAFVNCHAVVVTDMESWFDNISDLDDIAMALVGDCGGV
NQTKQLLRELVNHEARIPVFTLGYPENGMSEFPGALGSLSYPVKYPQLNNALQQASVYKN
QAENTLETEPLFRSLVGNSAKMKLVQKMIQQVSDSEANVLVLGESGTGKEVVARNLHYFS
SRREKPFVPVNCGAIPGELLESELFGHEKGAFTGAITARKGRFEMAEGGTLFLDEIGDMP
MPMQVKLLRVLQERTFERVGSNKTQKANVRVIAATHRNLETHIGDGRFREDLFYRLNVFP
IEMPALRERPEDIPLLIHELTQRIEHENRGAVRFTPAAIASLCRYSWPGNVRELANVVER
LVILYPYGTVDFDDLPEKYQIEGEPLADIVTEAISARTESATALKVTALNQSSQPGKNVN
SHNSTNDMLIQMDSIPEDGLDLREHLANLEYLLIKQALDEAAGVVAHAASRLKMRRTTLV
EKMRKYGIQRDVEIN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtgtaatatcttggtgatagatattgagcctcaacgccgagagacactttcc
acgctaatagcgtttgtaaattgtcacgccgtcgtcgtgacagacatggaaagttggttt
gataacatttctgatttagatgatatcgcaatggccctggtgggtgattgtggtggtgtg
aaccagacgaaacaactccttagagaattggtcaaccacgaagcaagaattcctgtattt
actctgggttatcctgaaaatggtatgagtgaatttcccggcgcacttggttcgctgagt
tatccagtcaaatatccccagctcaataatgctttgcaacaagcttctgtttataaaaat
caagctgaaaatacactagagacggaacctttgtttcgttccctggtgggcaatagtgca
aagatgaagctcgtgcagaaaatgattcaacaggtgtcagattctgaagcgaatgtcttg
gtattgggtgagtccggaacgggtaaagaggtagttgcccgtaacctgcattacttttcc
tcccgtcgtgaaaaaccctttgtgccggtaaattgtggtgcaatcccaggtgaattgcta
gaaagtgagttgtttggacatgagaaaggggcttttaccggggcaataacggctcgtaaa
ggtcgctttgaaatggccgagggtggcacactgtttcttgatgaaattggcgacatgccc
atgcctatgcaggttaagctgctcagagttttacaggaaagaacctttgaacgggttggc
agtaataaaacccaaaaagccaacgtcagagtgatcgcggcaacccaccgtaatcttgaa
acccatattggtgatggtcgtttccgagaggatttattttacagactcaatgtgtttccg
attgagatgccagcattacgtgaacgaccggaagatattccattactcatacacgagctg
acacaacgtatcgagcacgagaatcgtggagcagtcagatttactcctgcagcaattgct
tctttatgtcgctatagctggcctggaaatgttcgggaattggcgaatgtggttgagcgt
ttggtcatattgtatccctatggcacggtagattttgacgatctaccagaaaaataccaa
attgaaggtgagccattggcggatatcgttactgaggctatttcagcccgaaccgagtcc
gctactgctttaaaagtcactgcactgaatcagtcgtcacaaccaggtaaaaacgttaac
agccataattccactaacgatatgctgatacaaatggacagcatacctgaggatggcctg
gacttaagagagcatttggccaatctggaatatttactcatcaaacaagcactggatgaa
gcggctggcgtggtggcacatgctgcaagcagattaaaaatgcgtcggactacgctggtg
gaaaagatgcgtaaatatggtattcaacgagatgtggaaattaattag
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