Methylophaga pinxianii: LGT42_014135
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Entry
LGT42_014135 CDS
T08312
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpin03000
]
LGT42_014135 (slmA)
03036 Chromosome and associated proteins [BR:
mpin03036
]
LGT42_014135 (slmA)
Transcription factors [BR:
mpin03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LGT42_014135 (slmA)
Chromosome and associated proteins [BR:
mpin03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
LGT42_014135 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
TetR_C_13_2
HTH_20
TetR_C_15
EcoEI_R_C
HTH_10
HTH_24
HTH_AsnC-type
HTH_5
HTH_22
Motif
Other DBs
NCBI-ProteinID:
UPH45625
LinkDB
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Position
complement(2925295..2925909)
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AA seq
204 aa
AA seq
DB search
MTEQQSTRAQNKQSRHQAILEALATQLEQHPGQRITTAQLAESLGVSEAALYRHFPSKAR
MFEGLIEFSEDTVFGLIRRILDEDENAVSRCEKIMALMLGFSSKNPGITSVLVGTALTGE
TERLRQRVSQFFDRLETQFRQILRERELTLTQAGGRPVNETANLLLSIVEGRMQQFVRSG
FRQSPLQGWEQQWQLINMILRTYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcaacaatctacgcgtgcccagaataaacagtcgcgtcatcaagccattctg
gaagctttggcaacgcaacttgaacaacatcccggacaacgaattaccacagcacagttg
gctgaaagtctaggtgtatctgaagcggcgctttatcggcatttcccgagtaaagcccgc
atgtttgaaggtcttatcgaattctcagaagatacagttttcggtcttatccgcaggatt
ctcgatgaagatgagaatgcggtatctcgatgtgaaaaaatcatggcattgatgctagga
ttcagctcaaaaaatccaggtataacgagtgtacttgttggtacggctcttactggcgag
acagagcggcttcgccagcgagtcagtcaattttttgaccgattggaaacacagttccgg
caaatattgcgcgagcgtgaattaacattgactcaagctggtggtcgacccgttaatgaa
acggctaatctgcttctcagtattgttgaggggcgcatgcaacagtttgttcgtagtggg
tttcgccaatcaccacttcaagggtgggaacagcaatggcaacttatcaacatgattctc
aggacatacgcatga
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