Methylophaga pinxianii: LGT42_014200
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Entry
LGT42_014200 CDS
T08312
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mpin
Methylophaga pinxianii
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mpin03110
]
LGT42_014200 (clpB)
Chaperones and folding catalysts [BR:
mpin03110
]
Heat shock proteins
HSP100
LGT42_014200 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
AAA_24
ATPase_2
TniB
nSTAND3
IstB_IS21
RuvB_N
bpMoxR
AAA_7
DUF815
NACHT
AAA_25
NBD_SMAX1
ResIII
AAA_19
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
UPH45637
LinkDB
All DBs
Position
complement(2939355..2941940)
Genome browser
AA seq
861 aa
AA seq
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MQIDKLTSKFQEALGAAQSLAVGRDHQVIEPAHLLLALLNQQGGTVKPLLAQSGVNVPAY
QADLEAQLKRFPQVEGGNGDIRISTELNRLLNQTDKLAQQRQDQFISSELLVLAAVEEKN
QTGELLRKHGANKTNINNVIDKIRGGERVTDQNAEEQRQALEKYTIDLTARAESGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGMKNKRVLAL
DMGSLIAGAKFRGEFEERLKAVLNDLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLK
PALARGELHCIGATTLDEYRQYVEKDAALERRFQKVLVGEPSVESTIAILRGLSERYEVH
HGVDITDPAIVAAATLSHRYITDRNLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLI
QLKIERVALQKESDEASKKRLDTLETEMKKLAREYTDLEEVWKSEKAALHGSQHIKEELE
KARLELESANRSGNLEKMSELQYGRIPALEKQLDIATQAEMQDFTLLRNRVGEEEIAEVV
SKWTGIPVSKMLEGERDKLLKMDEALHERVIGQDEAVNSVANAIRRSRAGLSDPNRPNGS
FLFLGPTGVGKTELCKSLATFLFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL
GSNVIQEMAGEDNYEAMKKAVMEIVGQHFRPEFINRVDDVVVFHPLQKSQIRAIADIQLS
HLRKRLAEKEMGLELTDAALDRLSEAGFDPVYGARPLKRVIQHELENPLAQALLSGRFVA
GQVIKVDVEDDELVFTSELRH
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgataaactgaccagcaagttccaggaagcacttggcgctgcccaaagtctg
gccgttggacgggatcatcaggtgattgagcctgcacatttattactggcattactgaat
cagcaaggaggaaccgtcaaaccgctgttggctcaaagtggtgtgaatgtgcctgcctat
caagctgatttggaagcacagctaaagcgctttcctcaagttgagggcggcaatggtgat
attcgcatttcaaccgagctaaaccgtcttctgaatcaaactgataaattggcacaacaa
cgccaggatcaatttatttccagcgaactgttggtattggctgcggttgaggaaaaaaat
caaacaggtgaattgctgcgaaagcatggtgccaacaaaacgaatattaataatgtaatc
gataaaatccgtgggggcgaacgcgtgaccgatcaaaatgctgaagaacaacgtcaggca
ctggaaaaatatactatcgatctgactgctcgtgcggagagtggcaagctcgaccccgtg
attggccgggacgatgagattcgtcggaccattcaggtgctgcaacggcgtaccaaaaac
aacccggtattgataggtgaacccggcgttggtaaaaccgcgattgttgaaggtttggcg
cagcgtattgtcaacggtgaagtacctgaaggcatgaagaacaagcgggttctggcgttg
gatatgggctcattgattgcgggtgccaaattccgtggtgaattcgaggaacgattaaaa
gccgtactcaatgacctgtccaaacaggaaggccagatcattctgtttatcgatgaaatt
cataccatggtcggtgccggtaaagcagaaggcgcaatggacgccggaaatatgctgaaa
cctgccctggctcggggtgaattacattgcatcggtgcgacgacactggacgaatatcgc
caatacgttgaaaaagatgcggctctggagcgtcgttttcagaaagtactggtcggcgag
ccgagtgtggaatcgaccattgccatcttacgcggcctgagtgaacgttatgaagtgcat
catggtgtggatattaccgacccagctattgttgctgcagcgaccttatcgcatcgttat
atcaccgaccggaatctgccggataaagcgattgatttgattgacgaagccgccagccgg
attaggatggaaatcgactccaaacctgaagttctggatcgactggaaagacgcttgatc
caattgaaaattgagcgtgttgcattgcagaaagaatcggatgaagcttccaaaaaacgt
ttggatacgctggaaaccgagatgaaaaagctggcgcgtgaatacactgatttggaagaa
gtctggaaatcagaaaaagcggctttgcatggcagtcagcatattaaagaagaattggaa
aaagcccggttggaacttgaatcggctaaccgtagtggcaatctggaaaaaatgtctgaa
ttgcaatatgggcgtatacctgcattagagaaacaattggatattgcgacccaggccgag
atgcaggatttcaccttgctgcgtaaccgcgttggcgaagaagaaattgcagaagtggtt
tccaagtggaccggaatcccggtctccaaaatgctggaaggtgagcgtgataagctgctg
aaaatggatgaagctttgcacgaacgggttattggtcaggacgaagccgtcaattccgtg
gctaatgcgattcgtcgcagtcgtgccggtttatcagatcccaatcgtcctaatggttca
ttcctgtttttaggaccaacgggggtaggtaagaccgagctgtgcaaatctctggcaaca
tttttatttgataccgaagatgccatggtgcggattgatatgtctgaatttatggagaaa
cactcggtagcccgtctggtgggcgcacctcccggttatgttgggtatgaagagggtggt
tatcttactgaagcggtacgtcgtaaaccgtattcagtgatcttattagatgaggtcgaa
aaagcgcatccggatgtttttaatattctgttgcaggttctggacgatggacgtttaact
gatggacaaggacgtactgttgattttagaaatacagttatcgttatgacctccaatctg
ggttccaatgtgatccaggagatggctggtgaagataattatgaagctatgaaaaaagcg
gtaatggaaattgttgggcagcatttccgtcctgaatttattaatcgggtcgatgatgtg
gtggtgtttcatccgttgcaaaaatcacagattcgtgcgattgccgatattcaactgtca
catttacgcaaacgactggcagaaaaagaaatgggactggaattaaccgatgctgctttg
gaccgattatctgaggcaggctttgatccggtttatggtgcccggcctttgaagcgggtc
attcaacatgagttggaaaaccccttggcacaggcattgttatcgggacgttttgttgcc
gggcaagtgattaaggttgatgtggaagatgacgaactggtctttaccagtgagttgaga
cattaa
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