Methylophaga pinxianii: LGT42_014405
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Entry
LGT42_014405 CDS
T08312
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mpin
Methylophaga pinxianii
Pathway
mpin00300
Lysine biosynthesis
mpin00470
D-Amino acid metabolism
mpin01100
Metabolic pathways
mpin01110
Biosynthesis of secondary metabolites
mpin01120
Microbial metabolism in diverse environments
mpin01230
Biosynthesis of amino acids
Module
mpin_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mpin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LGT42_014405 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LGT42_014405 (lysA)
Enzymes [BR:
mpin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LGT42_014405 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
UPH45676
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Position
complement(2981469..2982722)
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AA seq
417 aa
AA seq
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MQDYFTQKDGELHAEQQSLRELAAQFGTPTYIYSRAALEQHWRAFDDAFSAYPHLVCYAV
KANSNLAVLNVLARLGSGFDIVSAGELARVIAAGGKAEKTVFSGVGKTVEEIDYALKTGI
RCFNVESIAELQRISDVAANLGKTAPISIRVNPDVDAQTHPYISTGLKENKFGIAIDDAL
SVYQQAASLPNLQIIGVDCHIGSQLTSVTPFVDALERVLALIDALAEHDITIKHLDIGGG
LGICYRDETPPTPAEYAKAMQALLKDRDLEIMLEPGRAIAGNAGILLTKVEYIKTTEAKN
FAIVDAAMNDLLRPALYQSWMAIEAVIPRNDEAEQAFDIVGPVCETGDFLGKDRTLAIQS
GDLLAIRSAGAYGFTMSSNYNSRPRAAEIMVDGAKMHVARQRESVESLYAGEQILQE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattatttcacacaaaaagatggtgaattacatgctgagcagcaatcactgaga
gaattggcggcgcagtttggtacaccaacttatatctattccagagcagcattagaacaa
cattggcgggcttttgatgatgctttcagtgcttaccctcatttggtctgttatgccgta
aaagccaactcaaatttagcggtactgaatgtattagccagactgggttcaggttttgat
attgtatcggctggcgaactggctcgggttattgcagcgggggggaaagcagaaaaaaca
gtcttttcgggggttggcaaaacagttgaagagattgattatgcattaaaaaccggaatt
cgctgctttaatgtcgaatcaattgccgagttgcaacggatcagtgatgtcgcagctaac
cttgggaaaacagcaccaatttctattcgggtaaatccagacgttgatgctcaaacccat
ccctatatctccaccggattgaaagagaataaattcggcatcgccattgatgatgcgtta
agcgtttatcaacaagcagcttcgttgcctaacctgcaaatcattggtgtggattgccat
atcggttcccagctgacttctgtgaccccatttgtggatgcactggaacgggttttagcc
ttgatagatgccttggctgaacatgacatcaccattaaacatctcgacattggtggaggt
ctggggatttgttatcgcgatgaaactccgccgacgcctgctgaatatgccaaagcaatg
caggcattgttaaaagatcgtgacctggaaattatgttggagccgggccgggccattgca
ggaaatgccggtattctgctgactaaagtggaatacatcaaaacaaccgaagccaaaaat
ttcgccattgttgatgcggccatgaatgatttattaagaccggcgttgtatcagtcatgg
atggcgattgaagctgttatccctcgcaatgatgaagccgagcaagcattcgatatagtc
ggccccgtctgtgaaactggggactttttaggcaaagatcgtaccttggcaattcaaagc
ggagatttattggcgattcggtccgctggagcgtatggttttactatgagctccaattat
aattcgcgaccaagggcggctgaaattatggtcgatggcgcgaaaatgcatgtggcacgt
caacgggaatcagttgaaagtctctatgctggcgagcagatattgcaggaataa
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