Mycoplasmoides pneumoniae FH: MPNE_0603
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Entry
MPNE_0603 CDS
T01926
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpj
Mycoplasmoides pneumoniae FH
Pathway
mpj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPNE_0603 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpj03021
]
MPNE_0603 (rpoC)
03400 DNA repair and recombination proteins [BR:
mpj03400
]
MPNE_0603 (rpoC)
Enzymes [BR:
mpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPNE_0603 (rpoC)
Transcription machinery [BR:
mpj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPNE_0603 (rpoC)
DNA repair and recombination proteins [BR:
mpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPNE_0603 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PHAX_RNA-bd
Motif
Other DBs
NCBI-ProteinID:
ADK87036
UniProt:
A0A0H3DMP7
LinkDB
All DBs
Position
complement(623115..626987)
Genome browser
AA seq
1290 aa
AA seq
DB search
MTKRNKKNNKLYKNIKAIKLSIASNDTILNWSEGEVTKAETINYKSLKPEPGGLFDEAIF
GPVKDYECACGKFKKIKYRGVRCDRCGVWVTESIVRRERMGHIALVSPVAHIWMSKELPS
PSKISLVLNISYKEVEQVLYFVNYIVLDTGKIKDPKIMPFKFKEVLDLAGKGSLTTRQKM
RRVIGYIFRNLIKNRSSEDYRKGKIFYESLKNSSLPFSLNDAFNYIKKYTGFRVGIGAEA
ILELLNKIDLNYEFSKLNDALRKAKKDSVEYAKVKKILRQLETISWFRNSKLHPKNMILH
TVPVIPPDIRPIIQLDGAKFTTSDINNFYRRVIIRNDRLRRILEDGTVPAIVVNNEKRLL
QESVDALFDNSSRHKPALSKDKRSLKSLTDRLKGKQGLFRHNLLGKRVDYSGRSVIVVGP
ELKMYEVGIPALMILKLFKPFIIHGLINKFDSNGNEIRPIASSIRQAEDMIKNQDDLIWG
IVYDVIKDRPVLLNRAPTLHRLGIQAFEPRIVDGKAIRLHPLVTTAFNADFDGDQMAVHV
PLSENAVNEARAILLASKHILGLKDGRPIVTPTQDMVLGNYYLTTERKGQTGEGIIFGTV
HEARAAYEAGKVHLHAIVGISTKAFPNKHFEAQGTLITTVGKIIFNDVLGDNIPYINEGE
FDEHACPQKFIVPPSGDVRAAIAAHQVLPAFGKKVISKLIDLLYTVVEFKDLPRILDNIK
ALGFKYSTHSSTTVSVFDIPKYSNKQQYFDEADQQVLKYKQFYNKGLLTDDERYKRVVKL
WNGVKEKVSSEIQDLIKREEYRDNSIVVMADSGARGNISNFTQLFGMRGLMSKSFNYERN
NQSKIIKDTIEVPIKHSFLEGLTINEYFNSSYGARKGMTDTAMKTAKSGYMTRKLVDATH
ELIINHDECGTRKGIVVEAIVETKTRSLVESLFDRIVNRYTIGPILDPETKAEIVPANSL
ITQELAKQICATSIKQVLVRSVIYCERENGVCQYCFGVDLSTGKLVELGTAVGVIAAQSI
GEPGTQLTMRTFHTGGVSTENNLAQGFERLKQIFEVVAPKDYERCVISEVKGVVKSITTT
QNAQEVLIESSVDERTYSIPFSAQLRVKVGDAVELGSKITEGSIDIRQLLRVAGIQRVRQ
YMIVEIQKVYRIQGIEIADKYVEIIIRQLTSLLQVTDAGSSNLFVGQLVHSHHLNELNKS
LLLSGKMPVIAINQVFGIDEAASKSNSFLSAASFQDTKKILTDAAVKTQVDYLLGLKENV
IIGGKIPAGTGFLTDEELAYLGAKTVQEEY
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcgtaataaaaagaacaacaagctgtacaagaacattaaggcaattaagctt
tcgattgcttccaacgacacgatcctaaactgatccgaaggggaagttaccaaggcggaa
acgattaactataagtccttaaaacccgaacctggtggtttgtttgatgaagccattttt
ggtccagtgaaggactatgagtgtgcttgtgggaagtttaagaagattaagtaccgtggc
gtgcgctgtgatcgctgtggtgtttgggtaaccgaatcaattgtgcgccgggaacgtatg
ggccacattgccctagtcagtccggtagcgcacatctggatgtcgaaggaactgccttcc
ccttccaagatctccttagtgttaaacatctcttataaggaagtggaacaggtcttgtac
tttgttaactacatagtattagatactgggaagatcaaagatcccaagatcatgccgttt
aagtttaaggaagtgttggacttagcaggcaagggttctttaaccacgcggcaaaaaatg
cgccgggtgatcggttacatcttccggaacctgattaagaacaggagtagcgaagactac
cgcaaggggaagatcttttatgaaagcttaaagaacagttcgttaccgttctccttaaat
gatgcctttaactacattaagaagtacactggcttccgcgttggtatcggggctgaagcc
atcttagaattgctcaacaagattgaccttaactatgagtttagtaagctcaatgatgcg
ttacggaaggctaagaaggatagtgttgagtatgctaaggttaaaaagatcttgcgtcaa
ttggaaacaattagctggtttagaaattcgaagctgcacccgaaaaacatgatcctgcac
acggtgccagtgatcccgccagacatccggccgattatccagttagatggtgctaaattt
accaccagtgacattaataacttctacagaagggtaattatccgtaacgaccgtttacgc
cgcatcttggaagatggtaccgtacctgccattgtggttaacaacgaaaagcgcttgtta
caagaatcagttgatgccttgtttgacaactcgtcgcgccacaagccagcgttatccaaa
gacaaacgttccttgaagtcactcaccgaccgcttaaaagggaaacaagggttgttccgt
cacaaccttttaggtaaacgggtggactattctggtcggagtgtaattgtggtgggtcca
gaactaaagatgtatgaggtcgggattccagcattaatgatcctcaagctgttcaaacca
tttattattcacgggttaattaataagtttgacagcaacggtaacgaaattagaccaatt
gcgtcctcgattcggcaagcggaggacatgattaaaaatcaggacgacctgatctggggg
attgtgtatgatgtcattaaggaccgtccggtgttattaaaccgggcacctactttgcac
cgtttgggaatacaggcctttgaaccgcggattgtcgatgggaaagcgattcgcctacac
ccgttagtgaccactgcttttaacgctgactttgacggtgaccagatggcggtgcacgtt
ccgttgagcgaaaatgccgttaacgaagcgcgtgctattctgttagcttccaagcacatc
ttgggactaaaagatggccggccaattgtcaccccaacccaggacatggtgttaggtaac
tattacctcactactgagcgtaagggtcaaacgggtgaaggcatcatctttggtaccgtg
catgaagcccgcgcggcatacgaagcgggcaaggtgcacctccacgccattgtcggcatt
agcaccaaagcctttccaaacaagcactttgaagctcaaggtactctaatcactacggtt
ggtaagattatctttaacgatgtgttaggggacaacatcccttacattaatgaaggggaa
tttgatgaacatgcgtgtccgcaaaagttcatagtaccaccaagtggtgatgtgcgtgct
gcgattgccgcacaccaagtgctccctgcctttggtaagaaggtcatctccaagttaatt
gacttactttacacggtggttgaatttaaggatctaccacggatcttggacaacattaag
gccttaggctttaagtactcgacccactcttccaccactgtatcggtgtttgatattccg
aagtactccaacaaacagcagtactttgatgaagcggaccaacaggtcttgaagtacaag
cagttttacaacaagggtttactgaccgatgatgaacggtataaacgggtggtgaaactg
tgaaacggtgtgaaggaaaaggtgtcgagtgagatccaggacttaattaaacgtgaagag
taccgtgataactcgattgttgtcatggccgattccggggcgcggggtaatatctccaac
tttacccagctgtttgggatgcgggggttaatgagtaagagctttaactatgaacgcaac
aaccagtccaaaattattaaggacacgattgaggttcctattaagcactccttcctggaa
ggtttaacgattaacgagtacttcaactcatcttatggggcgcgtaaggggatgaccgat
accgccatgaaaacggctaagtctggttacatgacccgtaaactggtggatgcaacccac
gaattgattattaaccacgatgaatgtggtacacgcaagggaattgtggtcgaagcaatt
gtggaaaccaaaacccgttcgttggtggaatcactgtttgaccgcattgtcaaccgttac
acgattggaccaattttagatcccgaaaccaaggcggaaattgtccctgctaacagccta
attacccaagagttagccaagcaaatttgtgccacttcgattaaacaagtgttagtgcgc
tctgtgatttactgtgaacgcgaaaacggcgtgtgtcagtactgtttcggggtcgatttg
tccaccggcaaactggtggaattgggtaccgctgtgggtgtaattgcagcgcaatcgatc
ggtgaaccaggaacccagttaacgatgcgtaccttccacaccgggggggtttcgaccgaa
aacaacttggcccaagggtttgaacgtttaaagcaaatctttgaagtagtcgcccctaag
gattacgagcgctgtgtcatttctgaagttaagggggtagttaaatcgattactaccacc
caaaacgcgcaggaagtgttgattgaatctagtgtcgatgaacgcacttactcgattccg
tttagtgcgcaactgcgtgtcaaggtcggtgatgcagtagaactaggttcgaagattacc
gaaggttcgattgacattcgccagttattacgggttgctgggatccaacgggtacgccag
tacatgattgtcgaaatccaaaaggtgtaccgtattcaggggattgagattgctgataag
tatgtcgaaattattatccgccagttgacgagcttactccaagtaaccgatgctggcagc
agtaacctgtttgtgggtcaactggtacacagtcaccacctcaatgaactcaacaagagc
ttgttgctgtcggggaagatgccagtgattgccattaaccaggtgtttgggatcgatgag
gcggccagcaagtcgaactccttcttgagtgccgcatccttccaagacaccaagaagatc
ttgaccgatgctgcggtaaaaacccaagttgactacctcttagggttgaaagaaaacgtg
atcattgggggtaagatcccggctggtactgggtttttaaccgatgaagaattggcctac
ctcggtgccaaaacggttcaagaggagtattaa
DBGET
integrated database retrieval system
