Microcystis panniformis: VL20_157
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Entry
VL20_157 CDS
T04037
Name
(GenBank) Group 2 RNA polymerase sigma factor Cyanobacteria-specific RpoD
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mpk
Microcystis panniformis
Brite
KEGG Orthology (KO) [BR:
mpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpk03021
]
VL20_157
Transcription machinery [BR:
mpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VL20_157
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AKV65396
UniProt:
A0A0K1RUL3
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Position
complement(113111..114418)
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AA seq
435 aa
AA seq
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MTTENDLKVSNSYHSRRREAIMSAINPSTLETEFISPSFSVLKLKENSIDLDEDFLGSDL
EDDLVSSPEKSYSNGTTTDLVRLYLQDIGRVPLLKRDEEVEQAQQVQRHLSLLKLCAAAV
KQGDAQVQQFVKLIEVRDQLTARLAHRPSLERWAKTAQISVSELKNALKAGKQRWAHLAG
LEVGELEEIIALGTRAKEQMIKANLRLVVSVAKKYQNRGLELLDLIQEGTLGLERAVKKF
DPTKGYRFSTYAYWWIRQGMTRAVATQSRMIRLPVHITEKLNKIKKAQRKISQIRGRTAT
VEEIAQELAVTPEAVREVLMTVPRSVSLEIKVGKEKDTELIDLLETEAVSSENHFVYESL
QRDIRELLADLTTREREVIELRYGFLDGKSHSLADIGRTLELSRERVRQIELKALQKLRQ
SGRGHQIRDYFEGLS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgactacggaaaacgatttaaaagtttctaattcctatcacagtcgccgtagagaagcc
atcatgtctgcaattaacccctcgacgctcgaaactgaatttatctctccctctttttct
gtcctaaaattgaaggaaaactcgatcgacctggatgaagattttctcggcagtgatttg
gaagatgatttagtatctagtcccgaaaaaagctacagcaacggcacaactaccgattta
gtacgtttatacctacaagacattggcagagtgcctctgctcaaacgggacgaggaagtt
gaacaagcgcaacaggtacagcgtcatctgtctttactgaaattatgcgccgccgccgtt
aaacaaggtgatgcacaagtacagcaatttgtcaagttaattgaggtgcgcgatcagcta
accgctcggttagcccatcgtccttccctagaacgttgggcaaaaactgcccaaatcagc
gtgtctgagttaaaaaatgctttaaaagcaggaaaacagcgttgggcgcacctagcgggc
ttagaagtgggggaattagaagaaattattgcccttggtacccgtgccaaagaacaaatg
atcaaggccaatttacgtctggtggtgtcggtggccaaaaaatatcagaatcgcggttta
gaattattggatttgattcaagagggaaccctgggtttagaacgggccgtcaagaaattt
gatcccaccaaaggctatcgttttagtacctatgcctactggtggatccgtcaaggaatg
acgagagcggtcgcaactcaaagccggatgattcgcttaccagttcatattaccgaaaaa
ctcaacaaaattaagaaggcacaacggaaaatctcccaaatccgcggtcgcactgcgacc
gtagaggaaattgcccaagagttagctgtgactcctgaagctgtgcgggaagtgttgatg
acagtgccgcgttcggtttccttggaaattaaggtaggtaaggaaaaagatacggaatta
atagaccttttggaaaccgaagcagtgtcttcagaaaatcattttgtctatgaatctttg
caaagagatatcagagaattattggcagatttaaccactcgcgaacgagaagtgattgaa
ttgcgctatggttttctcgatggtaaatcccattctttagccgatatcggtcgcactttg
gaattatcccgggaaagggtacgacaaattgagttgaaagcattgcaaaaattgcgtcaa
tccgggcgaggtcatcaaattcgcgattattttgaaggtttgagttag
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