KEGG   Microcystis panniformis: VL20_2413
Entry
VL20_2413         CDS       T04037                                 
Name
(GenBank) DNA-directed RNA polymerase gamma subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mpk  Microcystis panniformis
Pathway
mpk03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mpk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VL20_2413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpk03021]
    VL20_2413
   03400 DNA repair and recombination proteins [BR:mpk03400]
    VL20_2413
Enzymes [BR:mpk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     VL20_2413
Transcription machinery [BR:mpk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     VL20_2413
DNA repair and recombination proteins [BR:mpk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      VL20_2413
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 Cas9-BH
Other DBs
NCBI-ProteinID: AKV67508
UniProt: A0A0K1S0F9
LinkDB
Position
complement(2051390..2053270)
AA seq 626 aa
MKTPTDQRFDYVKIGLASPERIRQWGERNLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
KIFGPSKDWECWCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQIVYFNAYVVLDPGNAGNLSYKQLLSEDQWLEIEEEIYAEDSE
LVGIEVGIGAEAIQRLLQEINLEEEAERLRTEIVESKGQKRAKLIKRLRVIDNFVATGSQ
AEWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSRLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIYQCGLPREMAIELFQPFVIHRLIKLGIVNNIKAAKKMIQRGDANVWHVLD
EVITGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHIPLS
LEAQSEARLLMLACHNILSPATGRPIVAPSQDMVLGCYYLTAENPKAQKGGGRYFASMDD
AIRAFDQGLVDLHASVWLRLPVGEKVKTNKPDEEVLETETLPDGSIWKYYRERKTREKDG
QIIAQYVRTTVGRIIYNKTILEALVV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgaagactccaacagatcaaagatttgattacgtcaaaatcggtttagcgtcccccgaa
agaattcggcaatggggagaaagaaacctgcctaacggtcaagtcgtcggagaagtaacc
aaaccagaaacgatcaactatcggactctcaaaccggaaatggatgggttattctgcgag
aaaatttttggaccctcgaaggactgggaatgttggtgcggtaaatacaaacgcgtccgt
caccggggaattgtctgtgaacgttgcggagtggaagtcaccgagtcgcgggtacgtcgt
catcgcatgggttttatcaaattagctgcccccgtcacccacgtttggtatctcaaaggt
attcccagctatctcagtatcctgctcgatatgcccctgcgggacgtggagcaaatcgtc
tattttaatgcctatgtggttctcgatccgggtaatgccggcaatcttagttataaacaa
ctcctcagcgaagatcaatggttagagatcgaagaggaaatctacgcggaggattcggaa
ttagtcggtattgaagtgggtatcggggccgaggctatccaaagactcttacaggaaatt
aacctggaagaagaagcggaaagactgcggacggaaattgtcgaaagtaaggggcaaaaa
cgggcaaaattaattaaacgtctccgggtaatcgataactttgtcgccacgggttctcag
gcagaatggatggttttaagcgtaattcccgtgattccccccgatttacgcccgatggtg
cagttggacggcggccgttttgccacctctgacctgaacgatctctaccgtcgggtgatt
aaccgcaataaccgtttatcccgtctgcaagaaattctcgcccccgaaattatcgtccgc
aatgaaaaacggatgttacaggaggccgtcgatgctttaattgataacggtcgtcgcggt
cgcacggtggtgggggccaataatcgcgccctgaagtctttatcggatattatcgagggt
aaacaggggcgtttccgtcaaaatctcctcggtaaacgggtggactattcgggacgttcg
gttatcgttgttggtccgaaattgaagatctatcaatgcggtttaccccgggaaatggcg
atcgaattgttccaacccttcgttatccatcgtttaattaaattaggcatcgtcaataat
atcaaggcagccaagaaaatgatccaacggggggatgccaatgtttggcacgtcttggat
gaagtaatcacgggacacccggtgatgttaaaccgcgcccctaccctgcaccgtttgggc
attcaagcgtttgaaccgatactggtggagggccgggcgattcagttacatcccctcgtc
tgtcccgcttttaacgctgactttgacggggaccaaatggccgtacatattcccctctcc
ctggaggcacaatcggaagcgcgcttgttgatgttggcctgtcataatattctctcaccg
gcgaccggtcgcccgattgttgccccttctcaggatatggttttgggttgttattatctc
acggccgaaaatcccaaggcccaaaagggtggaggtcgttatttcgccagcatggatgac
gctattcgcgcttttgatcagggattggtagatctgcacgcttccgtgtggttgcgttta
ccggtgggagaaaaggtgaaaaccaataaacccgatgaggaagtcctggaaacggaaact
ctccccgatggcagcatctggaaatattatcgggaacgcaaaacccgcgagaaggatggt
cagataattgctcagtatgtgcgtactacagtagggcgaattatctacaataagacgatt
ctagaagctttggtggtctag

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