Microcystis panniformis: VL20_4402
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Entry
VL20_4402 CDS
T04037
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpk
Microcystis panniformis
Pathway
mpk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VL20_4402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpk03400
]
VL20_4402
Enzymes [BR:
mpk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
VL20_4402
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VL20_4402
DNA repair and recombination proteins [BR:
mpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VL20_4402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Tnp_IS91
NFACT_N
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AKV69329
UniProt:
A0A0K1S5A3
LinkDB
All DBs
Position
complement(3770424..3771266)
Genome browser
AA seq
280 aa
AA seq
DB search
MPELPEVETVRRGLNQVTQGKKIIGGEVLLQRTLAYPNCEATFLQGITQTTITNWQRRGK
YLLANLDNGSSIGVHLRMTGQLLWVKDTTPLPIHTRLRFFFANQQELRFVDTRTFGKIWW
IAADKTPESVITGLKKLGLEPFDRNFTPDYLYSHCQKSRRPIKTFLLDQNVVAGIGNIYA
DEVLFKSGIHPQTAANLLKIEQIDLLTKNIISVLEAAIAEGGTSFSDFLHVTGVNGNYGS
MAWVYGRTGENCRLCGATIARIKLSGRSSHFCPQCQVSRG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaagtagaaacggtgcgtcgcgggttaaatcaagttacccagggc
aaaaaaattatcggtggggaagtattattacagcgtaccctagcctaccctaattgcgag
gcaacttttctgcaaggaattactcagactacgattaccaattggcagcgccgaggcaaa
tatctcctcgccaatttagataatggtagcagtatcggggttcatctgcgtatgaccgga
caattgctctgggtaaaagataccactcccctgccgattcatacgcgcttacgcttcttt
tttgccaatcagcaagaattgcgctttgttgatacccgcactttcgggaaaatttggtgg
attgccgccgataaaaccccagaaagcgtgattactggtctcaaaaaactgggactggaa
ccctttgatcgcaattttacccccgattatctctatagtcactgtcaaaaaagtcgtcgt
ccgattaaaacttttctcctcgatcaaaatgtggtggcaggaattggcaatatctacgcg
gatgaagttctttttaaaagtggtatccatccccaaactgccgccaatctcttaaaaatt
gagcaaatagacttattgacaaaaaacattatttctgtattggaagcagcgatcgctgaa
ggcggcaccagttttagcgattttctccacgttacgggagttaatggcaattatggctcg
atggcctgggtttatggtcgtactggcgaaaattgtcgcctttgcggtgcaactattgcc
agaattaaattaagtggacgctcctctcatttttgtccccaatgtcaagtctcaagggga
tag
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