Microcystis panniformis: VL20_5911
Help
Entry
VL20_5911 CDS
T04037
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mpk
Microcystis panniformis
Brite
KEGG Orthology (KO) [BR:
mpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpk03016
]
VL20_5911
Enzymes [BR:
mpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VL20_5911
Transfer RNA biogenesis [BR:
mpk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VL20_5911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
YnaL
DUF2777
Motif
Other DBs
NCBI-ProteinID:
AKV70700
UniProt:
A0A0K1S9H7
LinkDB
All DBs
Position
complement(5182680..5184695)
Genome browser
AA seq
671 aa
AA seq
DB search
MEKGTLVEFRVQGERRLGVIDRPEGKKDWIVIDQGGNPHKLRPQRFDYIIKGGPSNYKEI
GNFLREVQPYLDPSGLEVAWELLAGENQLVTPETMAEILFSDRSPQFCYAAHCLLSDDKV
YFKNKGDGYEARSENQVEEIKHQLEVEQQRQREKGQFLQRLQQALAGETVEWSESDRIRL
ESLEKFILQPEQKYPAAMDILSLLGRSQTPEAAFELLVDLKWWSSHENLFLRRSSYPVQF
SKKVLDVTRLNLLNPPADADVNNRLDLTHQKIYTIDDESTEEIDDGLSVEILADGGHRLW
IHIADPSRLVLPDDELDLEARRRSTSLYLPTGMVPMFPLELAAGPMSLVQGKLCPALSFG
VILDETGAIADYRIHPSTIKPTYRLTYEDVDEMLHLDLQHEPEVKILNRWAKQRHAWRKS
QGSINIQMPESSIKVKANDEIIIELQEVSPSRQLVAEMMILAGEIAGRYCQEHEIPVPFR
GQPQPELPPDEELILLPAGPVRSCALRRCMPRSEMTTIPNRHASLGLNTYSQVTSPIRRY
TDLLTHFQLKAHLRGDQLPFTRDRMQEILYSVASSALEATSVERQTNRYWSLEFLRRQGD
QVWQALVLRWLREEENLGLILLEELGLELPHRFERSVSLGDRFQVQVSRSDPHRDEIRFR
ELSGFVSSQAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagggaacgctggtagaatttcgagtccaaggagaaaggcgcttaggggtgatc
gatcgcccagaaggtaaaaaagattggatcgtcatcgatcaagggggaaacccgcataaa
ctgcgtccccaacgcttcgattacattatcaagggtggtccatccaactataaagagatc
ggaaattttctgcgggaagtccaaccctatctagatcctagtggtttagaagtggcctgg
gaattattagccggggaaaatcagttagtcactcccgaaaccatggccgagattctcttt
tccgatcgcagtccgcagttttgctatgcggcccattgtctcttgagtgatgataaagtt
tattttaaaaataaaggggatggttacgaggcccgctcggaaaatcaggtagaggaaatc
aaacaccagctagaggtggaacaacagcgtcaacgggaaaaaggccaatttctccaacgt
ctccaacaggccctggccggtgaaacggtagaatggtcagaaagcgatcgaattcgtctg
gaatctctagaaaaatttatcctccaacccgaacaaaaatatccagcagccatggacata
ctctcgctgctgggccgttcccaaacccccgaggctgcttttgaattgttagtcgatttg
aaatggtggagtagtcacgaaaaccttttcctgcgacgcagttcctaccctgttcaattc
tcgaaaaaggtacttgatgtgacgcgtcttaatttactcaatccccctgcggatgcggat
gtcaacaatcgtctcgatttaacccaccaaaaaatttatactatcgacgatgaaagtacc
gaggaaatcgatgacggattatcggtggaaattctcgcggatggtggtcatcgtctctgg
attcatattgccgatcctagccgtttagtgcttcccgatgatgaattagacctagaagcg
cgtcgtcgcagtaccagtctctatcttcccacgggaatggttcccatgtttcccctagag
ttggccgccggtccaatgagtttggtacagggtaaactttgtcccgccttgagttttggg
gtaatcctcgatgaaacgggggcgatcgccgattatcggatccatcctagtacaattaaa
cccacctatcgcctcacctacgaagatgtggatgaaatgttacatctggatctgcagcat
gaaccggaagtgaagattctcaaccgttgggcaaaacaacgccacgcatggcgcaaatct
cagggatcgattaacatccaaatgccagaatcatccattaaggtgaaggctaacgacgaa
attatcatagaattgcaggaggtttccccatctcggcaattagtggcggaaatgatgatt
ttagctggagaaatcgccggtcgctactgtcaggaacacgagatacctgtgcctttccgc
ggacaaccacaaccggaattaccccctgatgaggagttaattttactacctgcgggcccg
gtgcgttcctgtgccttgcgtcgctgtatgccgcgcagtgagatgacgacgattcctaac
cgtcatgctagtctgggattgaatacctattcccaagtaacttcgccaattcgccgttat
actgaccttttgacccattttcaactaaaagcccatcttcggggcgatcaactgcctttt
acccgggatagaatgcaggaaattctctatagtgtcgctagttcggccctggaagccacc
tcagtggaacggcaaactaatcgttattggagtttggaattcttgcgacgacagggagat
caagtctggcaagctttggttttacgctggctgcgggaagaggaaaatttaggcttaatt
ttattggaggaattggggttagaattaccccatcgttttgagcgatcggtatctttaggc
gatcgctttcaagtgcaagttagtcgctctgatccccaccgcgatgagatccgttttcgc
gagttatcgggttttgtctcctcccaagcaagttaa
DBGET
integrated database retrieval system
