Microcystis panniformis: VL20_6417
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Entry
VL20_6417 CDS
T04037
Name
(GenBank) Group 2 RNA polymerase sigma factor RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mpk
Microcystis panniformis
Brite
KEGG Orthology (KO) [BR:
mpk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VL20_6417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpk03021
]
VL20_6417
Transcription machinery [BR:
mpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VL20_6417
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
MJ0093
DUF6079_5th
UTS2B
Motif
Other DBs
NCBI-ProteinID:
AKV71151
UniProt:
A0A0K1SAY3
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All DBs
Position
5610404..5611651
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AA seq
415 aa
AA seq
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MQAHDVLTLTEPPLDLDLIDLDEDFDDEDIELELEETSDSNDGKKTRRLASARRRDAARK
KPYTEDSIRIYLQEIGRIRLLRAEEEIELARKIADLLKLERIREDFCLYSDAEWGKQVFL
FERIEKIIAEKSEKEPKLSDIKAYLGKTELMAPMLEEWLAKSKEYLSAFKRRLYHGRRAK
EKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR
QAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATKMEMTIEKLRF
IAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVSKNLLREDLENVLDTLSPRERD
VLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYIR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccacgatgtactaacccttaccgagccgccattggatttagatttgattgac
ctagacgaagacttcgatgatgaggatatcgagttagagctagaagaaaccagcgatagc
aacgatggcaaaaaaacccgccgccttgccagcgctcgtcgtcgcgacgccgctagaaaa
aaaccctatacagaagattcgattcggatttatctgcaagagatcggcaggattcggtta
ttgagagcggaggaggagatcgaattagcgagaaaaatcgccgacctactgaaattagaa
cgcattcgcgaagatttttgcctctatagcgatgctgaatggggaaaacaggttttcttg
ttcgagcgcatcgagaaaattatcgccgaaaaatcggaaaaagaaccgaaattatcggat
attaaggcttatttaggtaagacggagctaatggctcccatgctggaagaatggctggcg
aaatcaaaggaatacttatcggcctttaagcgtcgtttgtaccatggtcgtcgcgctaag
gaaaaaatggtacaatcgaacctgcgtttagtggtttcgatcgccaagaaatacatgaat
cgcggtctttccttccaagatttaattcaagaaggttccctcggtttgatccgcgccgcc
gaaaaattcgaccacgaaaagggttataaattctccacctatgccacttggtggattcgt
caagccatcacccgggcgatcgcagatcaatcccgcaccattcgtcttcccgtccacctc
tacgaaaccatctcccggatcaaaaaaaccaccaagattctttctcaggaaatgcgtcgc
aaacccaccgaggaagaaatcgccaccaagatggagatgaccatcgaaaaactgcgtttt
attgccaaatctgcccaattaccgatttctctagagactcccatcggtaaagaagaagat
tcccgtttaggagactttatcgaagcggatggggaaaccccagaagatgaagtttctaaa
aatttattacgcgaggatttagaaaatgtcctcgatacccttagtcctcgcgaacgcgat
gtgctgcgtctgcgctacggtttagatgatggccggatgaaaacactcgaagaaatcggc
cagattttcaacgtcactcgcgagcgcattcgtcaaatagaagccaaggccctgcggaaa
ctgcgtcaccctaaccgcaatagtatcctcaaagagtacattcgttaa
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