Microcystis panniformis: VL20_6421
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Entry
VL20_6421 CDS
T04037
Name
(GenBank) DNA-directed RNA polymerase delta (beta'') subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpk
Microcystis panniformis
Pathway
mpk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VL20_6421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpk03021
]
VL20_6421
03400 DNA repair and recombination proteins [BR:
mpk03400
]
VL20_6421
Enzymes [BR:
mpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VL20_6421
Transcription machinery [BR:
mpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VL20_6421
DNA repair and recombination proteins [BR:
mpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VL20_6421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Biotin_lipoyl
RnfC_N
RPOC_hybrid
RPN1_C
DUF5694
Motif
Other DBs
NCBI-ProteinID:
AKV71155
UniProt:
A0A0K1SAT0
LinkDB
All DBs
Position
5616699..5620706
Genome browser
AA seq
1335 aa
AA seq
DB search
MFYNQTVDKGKLKKLIAWAYQNYGSARCSQMADELKNLGFRFATKAGVSISVDDLTVPPA
KRQMIESAEQEIRQTEQRYVRGEITEVERFQKVIDTWNSTSESLKDEVIRNFQVTDPLNS
VYMMAFSGARGNMSQVRQLVGMRGLMANPQGEIIDLPIKTNFREGLTVTEYVISSYGARK
GLVDTALRTADSGYLTRRLVDVSQDVIVREADCGTNRYIELTAMTDGDRVLIPLSDRLLG
RSLAEDVVVKGEVIATRNQIIDDETAEKLGKLVDKIKVRSPLTCEAARSVCQTCYGWSLA
HGHPVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVARQVRSPFEGSVRFLPGLS
IRNVRTRHGDERDQVEAPGEIKLTPKDKTKETVTYSLTPGSLLFVTDGATVSEEQLLAEI
TSDKVQKSTEKATKDVTSDLAGEVLFSQLVPEEKTDRQGNTTRIAQRGGLLWILSGEVYN
LPTGAEPVVSNGDQVQVGDVLAETKLVSTNGGLVRLAPNSREIDIVTASVSLDQAEVKVE
SSAGREQFIIHTVDGQRFLLKTTPGTKVQNHAIVAELIDDRYQTHTGGMIKYVDIEVAKG
SRKQGYEITKGGTILWIPEETHEVNKDISLLQVEDGQYVEAGEEVVKDIFCNSSGVVEVI
QKNDILREIIVKPGLLFMDLEPESSGIAQEQLIYPGTQLTPEVTIEELRQAEWVETNEGL
GLLLRPVQEFTVEDQSTSPTQGSANQEGGRHIELRSVQRIFFKDGERVKSVEGCQLISTQ
LVLEISSEEPESVSHLTADIELEPIEDRDCQRLQLVILESLVLRRDSDNDPLGGNIQTRV
LVQDGDEIPPGAVVARTEIQCKEAGEIRGIRKGSEAVRRLLIVSDRDEFILPFAVAPTVK
AGDLVIAEAEIAAGVLAPNSGQVLAVDQTTTGYEIRLRKARPYRVSAGAILHIDEGDLVQ
RGDNLVLLVFERSKTGDIIQGLPRIEELLEARKPKEACVLARKPGVCQVEYQDSEIVDIK
VVEDDGTISEYPLLGSQNPLVSDNQRIDAGQALTDGQANPHEILEVFFNYYVDSLGSYEA
ALKALEKTQMFLVDQVQSVYQSQGIDIADKHIEVIVRQMTSKVRIDDGGDTSMLPGELLE
LRQVETVNEAMSITGGAAAKYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKS
DWLRGLKENVIIGRLIPAGTGFNSHENMAGISDYTPPEEEYNYNNNRGYYAAPSSPSFPP
RPGFGDSSDDSDMILDDQTARAYAEGDVVDLEDDEMAFLSSRGSSRFSRQPISDSWSEAD
EEGDEDDFEGDYEEE
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgttttataaccaaactgttgacaaaggaaaactgaaaaaactgatcgcttgggcctat
caaaactacggttcggcgcgctgttcacaaatggccgatgaattgaaaaacctcgggttt
cgtttcgctaccaaagcaggggtttccattagtgtggatgatttaaccgtaccgccagct
aaacgacaaatgatcgaaagtgccgaacaggaaatccggcaaaccgaacagcgttatgtg
cgcggggaaatcaccgaagtggaacgcttccaaaaagtaattgatacttggaatagtaca
tctgaatcgcttaaagatgaagtaattcgcaacttccaagtgaccgatcccctcaactcc
gtctatatgatggctttctccggggcgcggggcaatatgagccaagtgcgtcagttagtg
ggaatgcggggattaatggctaatccccagggggaaattattgacctcccgattaagact
aacttccgggaaggattgaccgttaccgaatacgttatttcctcctacggggcgcgcaaa
ggtttagttgataccgccctacggacggcagattccggttatctgacccgtcgtctagtg
gatgtgtcccaagatgtcatcgtccgcgaggcagattgtggcaccaatcgttacatcgaa
ttaactgctatgaccgatggcgatcgcgtgttaattcccttaagcgatcgcctattaggt
cgttccttggccgaagatgtggtggtcaagggagaagtgatcgccacccgcaaccagatt
atcgatgatgaaaccgccgaaaaactgggcaaactggtcgataaaatcaaagtccgcagc
cccttaacctgtgaagcagcccgctcagtttgccaaacctgttacggttggagtctggcc
cacggtcatccggtggatatgggggaagcagtggggattattgcagcccaatcgatcggg
gaaccgggaactcagttaaccatgcgtaccttccacactgggggcgtatttaccggagaa
gtggcccggcaagtgcggagtcccttcgagggaagcgtgcgttttctgccggggttaagt
atccgtaacgtgcgaactcgccacggggatgaacgggaccaggtggaggcaccgggggaa
attaaattaacacccaaggataaaactaaagaaactgtcacctactctttgactccggga
tcactgctatttgtcaccgatggggcaacggtaagcgaggaacagttactagcggaaata
acctccgataaagtccaaaaatccacggaaaaagccacaaaagacgtaaccagtgactta
gccggcgaggtgctattctcgcaattagtcccagaggaaaaaaccgatcgccaaggcaat
accacccgcatcgcccaacgggggggattactatggattctctccggagaagtgtataac
ttgccaaccggggctgaacccgtggtcagtaacggcgatcaagtacaagtgggggatgtt
ctagcggaaactaagttagtatccactaacggcggtttggtgcgtttagcccccaatagc
cgggaaatcgatatcgtcaccgcttccgtgtctttggatcaggccgaagtaaaagtggaa
agtagcgctggtcgggaacaatttattattcatacggtcgatggtcagcgcttcctgctg
aaaaccactccggggacaaaggtacagaatcatgctattgtcgccgagttaatcgatgat
cgctatcaaacccacaccggcgggatgattaaatacgtcgatatcgaagtcgccaaaggc
agccgcaaacagggttatgaaatcaccaaaggcggcacgatcctctggattcccgaagaa
acccacgaagtcaataaagatatctccctcttacaggtggaagatgggcagtatgtggaa
gcaggggaagaagtggttaaagacatcttctgtaactctagcggtgtggtggaagtgatc
cagaaaaatgacatcctccgggagattattgtgaaaccggggctgttatttatggatctc
gaaccagaatcctccggaattgcccaagaacagttaatttacccggggacacagttgact
cccgaagtgacgatcgaggagttacggcaagcggaatgggtggaaactaacgagggttta
ggattactgctgcgaccagtacaggagttcaccgtagaagaccaatccacttctcccacc
caaggttccgctaaccaagaaggaggacgacatatcgaactgcgatcggtgcagcgcatc
ttctttaaagacggggaaagagttaaatccgtcgagggttgtcaactgatcagcactcaa
ttagtcctagaaatttctagcgaagaaccagaatcggtctcccatctgacggccgatatc
gagttagaaccgattgaggacagggattgtcagcgtttacagttagttattctcgaatct
ctggtgctgcgtcgggatagtgataatgatcctttaggcggtaatattcagactcgcgtt
ctcgtccaagatggcgatgaaatcccaccgggggcagtggtggcccggactgagattcag
tgtaaggaagctggagaaattcgcgggattcgcaagggtagcgaagcggtacgccgtctt
ttaattgtcagtgaccgtgacgagtttattctcccgttcgctgttgctcccaccgtcaaa
gctggggatctggtaatcgccgaagctgagatcgctgccggagttttagcccccaattcc
ggtcaagtgctggccgttgaccaaaccaccaccggctatgaaatccgtctgcgtaaggcc
cgaccctaccgagtgtcggccggggcgattctgcacatcgatgagggagatctggttcaa
cggggcgataatttggtgctgttggtgtttgagcgctcgaaaactggggatatcattcaa
ggtttacccagaatcgaagaactgctcgaagcccgcaaaccgaaagaggcttgtgtctta
gcacgcaaaccgggagtttgtcaagtggagtaccaagattctgagattgtcgatattaag
gtggtcgaggatgacggcacgatcagtgaatatccgcttttaggcagtcaaaaccccctg
gtgagcgataatcagcgtatcgatgcgggtcaggcgttaaccgatggtcaggctaatccc
cacgagattttagaggtgttctttaattattatgtggatagcttgggcagttacgaagcg
gccttaaaagccttggaaaaaacccagatgttcctcgttgatcaggtacagtcggtttat
caatcccaggggatcgatattgccgataaacacatcgaagttatcgtgcgtcagatgacc
tctaaggtgcggatcgatgacggcggcgataccagtatgttgcccggggaattgttggaa
ttgcgacaggtggagacggtaaatgaagccatgtcaatcaccggtggggcggcggctaaa
tatacgcccgtactactgggaatcaccaaagcttccttgaataccgatagctttatcagt
gccgcctccttccaagaaaccacccgcgtcctcacggaagcggcgatcgaaggcaagtcc
gactggttacggggtctcaaggaaaacgtgattatcggtcgtctgattccggcgggtact
ggctttaattcccacgaaaacatggcggggatcagcgattacacccccccagaggaggaa
tataactacaacaacaatcgtggttattacgctgcccccagcagtcccagtttccctcct
cgtcccggtttcggcgatagtagtgacgatagcgatatgattcttgacgatcaaaccgct
cgcgcctacgctgagggtgatgtggtcgatttagaggatgatgaaatggctttcctctcc
tcccgcggcagcagtcgctttagtcgccaacccatcagcgacagctggtcagaagccgat
gaggaaggggatgaggacgatttcgagggggattacgaagaagaataa
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integrated database retrieval system
