KEGG   Methanosphaerula palustris: Mpal_0057
Entry
Mpal_0057         CDS       T00823                                 
Name
(GenBank) XPG I domain protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mpl  Methanosphaerula palustris
Pathway
mpl03030  DNA replication
mpl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mpal_0057
   03410 Base excision repair
    Mpal_0057
   03450 Non-homologous end-joining
    Mpal_0057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpl03032]
    Mpal_0057
   03400 DNA repair and recombination proteins [BR:mpl03400]
    Mpal_0057
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mpl04147]
    Mpal_0057
DNA replication proteins [BR:mpl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mpal_0057
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mpal_0057
DNA repair and recombination proteins [BR:mpl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mpal_0057
Exosome [BR:mpl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Mpal_0057
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: ACL15451
UniProt: B8GIA0
LinkDB
Position
59946..60947
AA seq 333 aa
MGVALREVLTEYKHPRTWETLAGTAAIDGNNALYQFLSIIRQPDGTPLMNSEGRITSHLS
GVFFRTLRFLEKGIRPVYIFDGKPPALKQETIESRREVRREAGVQWEAALARGDQEEAYK
QARASSRVTPEIIATSKELLTLMGVPCVQAPSEGEAQAASMAASGAVTYAVSQDYDSLLF
GAPLLVRNLTVSSKRRVQGRTIAVQPESIRLDEVLGGLGITREQLIEAGILIGTDFNPGI
RGVGPKTALKIVKKDGFADMIAEKLPDFDPSPILQFFRSPPVIANLSLDWQPPDQAGIED
LLCGEYGFATERVRTALQKISGPPGQKTLDRWF
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgggtgttgctctccgtgaggtgctgaccgagtacaagcatcccagaacctgggagacc
ctggccgggaccgccgccatcgacgggaacaatgccctttaccagttcctctcgatcatc
cggcaaccggacggcaccccgctgatgaacagcgaagggaggatcacctctcacctctcc
ggggtcttcttccgcacgctccggttccttgagaaggggatccgcccggtgtatatcttc
gacggcaaaccccctgctctgaaacaggagacgatcgagagccggcgggaggtgagacgg
gaggccggcgtccagtgggaggctgctctggcccggggggaccaggaggaggcgtacaaa
caggcccgtgcctcctcccgggtcactcctgagatcatcgccacctcaaaagagctgctg
accctgatgggcgtcccctgcgtgcaggctccgtccgagggggaggcccaggccgcctcg
atggccgcttccggggcggtcacctacgccgtctcgcaggactacgactccctcctcttc
ggagccccgctgctggtcaggaatctgaccgtctcgagcaaacggcgggtgcaggggagg
acgatcgcagtccagcccgagtcgatccgtctcgatgaggtgctcgggggactcgggatc
acccgtgaacagttgattgaggccggcattctgatcggcaccgacttcaaccccggcatt
aggggagtcggaccgaagacagcgctgaagatcgtgaagaaggacgggttcgccgacatg
atcgccgagaagttaccggacttcgacccgtccccgatcctacagttcttccgctccccg
ccggtgatcgccaacctctccctggactggcagccgccggaccaggcagggatcgaggat
ctcctctgtggggagtacgggtttgcaacagaacgggtaagaactgcccttcagaagatc
agcggccctcccgggcagaagaccctggaccgctggttctga

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