Methanosphaerula palustris: Mpal_0546
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Entry
Mpal_0546 CDS
T00823
Name
(GenBank) THUMP domain protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mpl
Methanosphaerula palustris
Brite
KEGG Orthology (KO) [BR:
mpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpl03016
]
Mpal_0546
Enzymes [BR:
mpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mpal_0546
Transfer RNA biogenesis [BR:
mpl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mpal_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Motif
Other DBs
NCBI-ProteinID:
ACL15919
UniProt:
B8GEV2
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All DBs
Position
541479..542708
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AA seq
409 aa
AA seq
DB search
MIEQVKAILGYGEICDHCLGRFYGKLSFGLTNQERGHALRVAAALDANEPYHPAAGVCWV
CNNLFDQVGLWAEKVCTALEGLEYSTILVGTRVPPLLTESEEMVWSDQNLRSPEPLKSEM
NREVGKAVSAKTGRMVDFKHPDVVVILDIAGDQVEVQVNPIFIYGRYQKFERGIPQTHWD
CRACHGSGCEACNFTGKQYADSVEELVGRPVMVLLKATGAVLHGAGREDIDARMIGTGRP
FILEVDTPQIRSADLKELELAVNTAAAGRVAVEFDRWALRTEVETLKSNKAHKKYRILVE
VEGDLSEDELNLALNRLQGVTIHQRTPRRVAHRRADKIRERDVLEIRCLGIEEGRYSIEV
LGEAGLYIKELISGDDGRTRPSLTEILGRPAQVTSLDVVLVEEMANGGE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaggtgaaggcgatcctaggatatggcgagatctgtgaccactgccttgga
cggttctatggaaaactgtcctttgggctgaccaatcaggaacgggggcatgccctccgg
gtggcggcggcgctcgacgccaatgaaccgtaccacccggcagcaggggtttgctgggtc
tgcaacaatctcttcgaccaggtcggtctctgggctgagaaagtttgtactgccctcgag
gggctcgagtattcgacgattctggtcgggacccgggttccaccgttgctgaccgagagc
gaggagatggtctggtcagatcagaatctccgctcacccgaaccactcaagtctgagatg
aaccgggaggttggcaaggcggtctctgctaagaccggccgcatggtcgacttcaagcac
ccagatgtggttgtgatcctggatatagccggtgatcaggtcgaagtgcaggtgaacccg
atcttcatctatggcaggtaccagaagtttgaacgggggatcccgcagacccattgggac
tgccgggcctgtcatggcagtggctgtgaagcctgtaacttcaccggcaagcagtatgcc
gactcggtcgaggaattggtcggcaggccggttatggtcctgctgaaggccactggtgcc
gttctgcatggtgcagggagggaggatatcgatgcccggatgatcggcacaggaaggccg
ttcatccttgaagtggacacgcctcagatccggtcggctgacctcaaagaacttgaactg
gccgtcaacaccgctgcagcaggcagggttgctgtagagttcgaccggtgggcgctgcgg
accgaggtggaaacccttaagtccaacaaagcgcataaaaaatacaggatcctggtagag
gtcgaaggcgatctgtcagaggatgagctgaatctggctctgaatcgcctgcagggggtc
acaatacatcagcgcacaccccgccgggttgcccatagacgggcagacaagatcagggag
cgtgatgtccttgagatcaggtgtcttggtatcgaagaaggcaggtattcaatcgaggtt
ctcggtgaagccggcctttatatcaaggaactgatctcaggggatgatggcaggacacgc
cccagtcttacggagatccttggaagacctgctcaggtgaccagccttgatgtagtgctg
gtcgaagaaatggcaaatggaggagagtaa
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