KEGG   Methanosphaerula palustris: Mpal_0625
Entry
Mpal_0625         CDS       T00823                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mpl  Methanosphaerula palustris
Pathway
mpl03420  Nucleotide excision repair
mpl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Mpal_0625
   03430 Mismatch repair
    Mpal_0625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpl03400]
    Mpal_0625
Enzymes [BR:mpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mpal_0625
DNA repair and recombination proteins [BR:mpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Mpal_0625
   MMR (mismatch excision repair)
    Other MMR factors
     Mpal_0625
SSDB
Motif
Pfam: UvrD-helicase PDDEXK_1 UvrD_C AAA_19 UvrD_C_2 Cas_Cas4 Viral_helicase1 AAA_30 ADDB_N AAA_11 AAA_12 DUF1512
Other DBs
NCBI-ProteinID: ACL15996
UniProt: B8GFE8
LinkDB
Position
complement(620224..623283)
AA seq 1019 aa
MSLNPAQQTAVENAGTQLILAGPGSGKTRVITEKILHLLDHGVPPTEILALTFSEKAAAE
MNDRIEMKRPNLDLEIHTFHSFCLEVLQDNMLSSGLNVSGGVISRTSQLVWGLQHIDIFD
FEHIKLGNNAADVIEAVIDGISAFRDELIAPDELDDYLTQKQSVQVEEAEQEYLLQLGDL
LKVYRAYEQYKRERNLIDFDDMIHGAVTLFRSDPALRSSYRSRFRYILVDEFQDTNYAQL
QLIKEIAGENLCVVGDDDQTIYRFRGAYLTNIRDFKQWAATHTETLLDQNYRNSGAVLSL
ALQVMAGAPGRREKALFTEKGDGEPVTVAACGNDAGEAEYVAAEIEKLVGTPYHSRQDGG
DRPLEYRDFTVLCRTKADGKKFQAALQRHAIPCEYQANVDFMQLPVVRDMVAYLRIIDNP
LMAAVPLNRVMKICSIPETVVQKINAAAIKRGDDDDDGVYETMQDAASIVPDHAEPVGEV
VRMLAPFIEQKERYTLPELVHAVMMQASGLYRSALTDTADMVRLYLATFHEIVLEFDRTT
PEATIPGLLQYLELLGAFPVEVVREQKEAGDAVQILTAHKSKGKEFPVVFVADLAREKFP
LRYSPKRFRVPGDLARGLRTGDDEKALFVQEERRLLYVAMTRAEERLYLTYAKWYGDNKR
ERKPSPFLEELNFRENPLITVVEPPACAPALPVTAGDPVEDLRTSLQEEVVRAVSEMRIS
TAIQTLVTLEGVREYAEQGTDDFDRDAFLAKAGSRVGADTRITTLLDPPHQSLIPPNYRF
SASALSTYQDCPLQFKFANLYRVPLPRQPQLVFGSTLHSVIEHLTRNPDPSQSLRDQGLA
LLEEYWSPEPYESKTQESEAHDSASALLDTYLAWQAGNPNTVIGVEKEFTFSFAGHSIHG
FIDRLEQTPDGNYVVIDFKSGKKPDSLTKKAVGEHIQLNLYSMAVQQMYQVLPEKAELFY
LKDGKRVSYLPTEETIQVFTGTLSTLIGGITREEFPPKSDNQRCQWCAYRPLCGTDLKG
NT seq 3060 nt   +upstreamnt  +downstreamnt
atgtccctcaaccccgcccagcagaccgccgtggagaacgccggcacccagctgatcctg
gccggcccaggctcaggcaagacccgtgtgatcaccgagaagatcctccacctcctcgac
catggcgttccccccaccgagatcctcgccctcaccttctcagagaaggccgccgccgag
atgaacgacaggatcgagatgaaacgcccgaacctcgacctggagatccacaccttccac
tccttctgcctggaggtcctccaggacaacatgctgagcagcgggctgaacgtctcgggc
ggggtgatcagccggaccagccagctcgtctgggggctgcagcatatcgacatcttcgac
tttgagcacatcaaactcgggaacaacgcggccgacgtgatcgaggcggtcatcgatggg
atcagtgcgttccgggacgaactgatcgcaccggacgagctcgacgactacctgacccaa
aaacagtcggtccaggtcgaggaggccgagcaggagtacctactgcagctcggagacctg
ctgaaggtctaccgggcctacgagcagtacaagcgggagcggaacctgatcgacttcgac
gatatgatccacggggccgtcaccctctttcgatccgacccggctctccgttcatcgtac
cggtcccggttccggtacatcctggtcgacgagttccaggacaccaactatgcccagctc
cagctgatcaaggagatcgccggcgaaaacctctgcgtcgtcggagacgacgaccagacc
atctaccggttccggggcgcctacctcaccaacatcagggacttcaagcagtgggccgcc
acccacaccgagaccctcctcgaccagaattacaggaactcaggcgcagttctctccctt
gccctccaggtgatggccggcgcaccaggccggagagaaaaggccctcttcaccgagaaa
ggcgatggagaaccggtcaccgtcgccgcctgcgggaacgatgcgggtgaggccgagtac
gtggcagccgagatcgagaagctggtcggcaccccctaccactcaaggcaggacggagga
gaccgaccgctcgaataccgcgacttcacagtcctctgtcgcacgaaggcagacggaaag
aagttccaggccgccctgcagcggcacgccatcccctgcgagtaccaggcgaacgtggac
ttcatgcagctgccggtcgtcagggacatggtcgcatacctccggatcatcgacaacccg
ctgatggccgccgtcccgctgaaccgggtcatgaagatctgctccatccctgagaccgtg
gtgcagaagatcaatgcggcagcgataaagaggggtgatgacgacgatgacggcgtctat
gagacgatgcaggacgcggctagtatcgtccctgatcatgcagagccggtcggagaggtc
gtccggatgctcgcccccttcatcgagcagaaggagcggtacaccctcccggaactggtc
catgcagtgatgatgcaggcctccgggctgtaccgctcggcgctcaccgatacggcagac
atggtcaggctctacctcgcgaccttccacgagatcgtcctggagttcgaccggacgact
cccgaggcgaccatccccggccttctccagtatttggagctgctcggcgccttccccgtg
gaagtcgtcagagagcagaaggaggcaggtgacgcagtgcagatcctgaccgcccacaag
agcaaggggaaggagttcccggtggtcttcgtcgcagacctggccagggagaagttccca
ctcaggtacagtcccaagcggttccgggtccccggcgacctggcccgggggctccggacc
ggcgacgatgagaaggcactctttgttcaggaggaacgccggctcctgtacgtcgcgatg
acccgagccgaggagcggctgtacctgacctatgcgaagtggtacggtgacaacaaacgt
gagaggaagccgtccccgttcctggaggaactcaacttccgggagaacccgctcatcacg
gtcgtcgagcccccggcctgcgccccggccctgccggtgacggcaggagaccctgtcgag
gatctccgaacctcgctgcaggaggaggtggtccgggctgtctcggagatgcgcatctcc
acggccatccagacccttgtgaccctcgaaggagtgcgggagtacgcagagcagggtacc
gatgacttcgaccgggacgccttcctcgcgaaagcagggagccgggtcggggccgacacc
aggatcacaaccctcctcgacccgccccaccagtcgctcatcccaccgaactaccggttc
tccgcctcagccctctcgacctaccaggactgcccgcttcagttcaagttcgccaacctc
taccgggtcccgctgcccaggcagccccagctggtcttcggttccaccctccattcggtg
atcgagcacctcaccaggaaccccgacccctcacagtcgctccgcgaccaggggctcgca
ctcctcgaagagtactggtccccagagccgtacgaatcgaagacccaggagtcggaggcc
cacgattcggcatcggctctcctcgacacctatctggcatggcaggcaggaaacccaaat
accgtgatcggggtcgagaaggagttcaccttctccttcgccggtcatagcatccatgga
tttatcgaccggctcgagcaaactccggacggaaattatgtggtgatcgacttcaagtca
ggcaagaaacccgactccctcacgaagaaagcggtcggcgaacatatccagctgaacctt
tactccatggctgtccagcagatgtatcaggtactcccggagaaggccgagctcttctac
ttaaaggatggaaaacgggtctcgtatctcccgaccgaggagacgatccaggtcttcact
gggacactcagcaccctgatcggagggatcaccagggaagagtttccacccaagtcggac
aatcagagatgccagtggtgtgcgtaccgacccctctgtggtacagatctgaaaggctaa

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