| Entry |
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| Name |
(GenBank) AAA family ATPase, CDC48 subfamily
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| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
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| Organism |
mpl Methanosphaerula palustris
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| Pathway |
| mpl04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:mpl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mpal_0801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mpl03019]
Mpal_0801
03009 Ribosome biogenesis [BR:mpl03009]
Mpal_0801
04131 Membrane trafficking [BR:mpl04131]
Mpal_0801
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:mpl04147]
Mpal_0801
Messenger RNA biogenesis [BR:mpl03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mpal_0801
Ribosome biogenesis [BR:mpl03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mpal_0801
Membrane trafficking [BR:mpl04131]
SNARE
SNARE associated proteins
Others
Mpal_0801
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mpal_0801
Exosome [BR:mpl04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mpal_0801
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(813145..815565)
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| AA seq |
806 aa
MIIMADNDYVNVVVKEAARDDAGRGIARVSMDVMRALGFVSGDVIEIQGKRKANAIVWPG
FPEDTGRGILRIDGNIRSNAGTGVDETVRIRKVQASVATKVVIQPTQPIRLVGGEQYLRR
LLHGRSVMEGQSLRVDVIGNPLTFVIAKVTPKGIVVVTDETTIELKETPYKPEEGKKEAA
TADIHYEDIGGLGRELQQVREMIELPLRHPEIFEKLGIQPPKGVLLYGPPGTGKTLIAKA
VANEVDAHFITLSGPEIISKYYGESEGNLRQVFEEAQQNAPTIIFIDEIDSIAPKREDTK
GEVERRVVAQLLALMDGLKGRGEVIVIAATNLPDALDPALRRGGRFDREIEIGIPDRNGR
EDIFKVHTRGVPLAEDVDLKDLSETTHGFVGADIALLVKEAAMHALRKVIPKIKDDEGIP
DEVLDQLKVTNADFTEARKHVDPSAMREVLVEVPDVKWEDIGGLEQVKKDLTETVEWPLK
YADVFEKLETSAPKGILLFGPPGTGKTMLAKAVANESQCNFISVKGPELLSKWVGESEKG
VRDIFRKARQAAPSIIFFDEIDALVPSRGSYTGSSHVTESVVSQILTELDGLEELKNVVV
LAATNRPDMIDKALMRPGRLDRHLYVPPPDREGRKKIFEVYLRHAEAILSGDVKIDDLVE
KTERFVGADIEALVREAKLSAMREFIGVMTGKTELERTEAIGNVRITGKHFEDALLKVNG
SLDRDTTEQSERQSWEILFNQDQRMILEDAAAVIKRAELKGIGTTVPDSQKSEIEDLRTA
LYRQTKDFGLIKERTAQVKGHLDGTG |
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| NT seq |
2421 nt +upstreamnt +downstreamnt
atgataattatggcagataatgattatgtcaacgtcgtggtgaaggaagccgcacgggat
gatgccggccggggtatcgcacgtgtctcgatggacgtgatgagagcgctcggattcgtc
agcggggatgtaatcgagattcagggcaagaggaaggcgaacgccatcgtctggccggga
tttccggaggacaccggcagagggatcctccggatcgacgggaacataagatccaatgca
ggaaccggggtcgacgagaccgtcaggatcaggaaggtgcaggcctcggtcgcaaccaag
gttgtgatccagccgacccagccgatccggctcgtcggtggcgaacagtacctgaggagg
ttgttgcatggtcggtcggtgatggaagggcagagtctgcgggtcgacgtgatcggaaat
cctctcacctttgtgatcgccaaagtcacaccgaaggggatcgtggtcgtcaccgatgag
accaccatcgaactgaaggagaccccctacaaaccggaggagggaaagaaggaagcggcg
acggcggacatccactacgaggatatcggcgggctcggccgcgaactgcagcaggttcgg
gagatgatcgaactgccgctccgccacccggagatctttgagaagctcgggatccagccg
cccaagggggtgctgctgtacgggccgcccggcactggcaagacgttgatagcgaaggcg
gtggccaacgaggtggacgcccacttcatcaccctttcaggtccggagatcatctccaag
tactatggtgagagcgagggaaacctccgccaggtcttcgaggaggcccagcagaacgcc
ccgacgatcatcttcatcgatgagatcgattcgatcgcacccaagcgggaggataccaag
ggcgaggtcgaacgccgggtggtcgcccagttgctcgccctgatggacgggctgaagggg
cgtggcgaggtgatcgtgatcgcggccaccaaccttccggatgcgctcgacccggcactc
cggcggggcggccggttcgatcgagagatcgagatcgggatccctgaccggaacggccgg
gaggatatcttcaaggtccacaccaggggtgtccccctcgccgaagatgtggacctcaag
gatctctcagagaccacgcatggattcgtcggtgccgatatcgccctgctggtcaaggaa
gccgcgatgcacgcccttcggaaggtgatcccgaagatcaaggatgacgaggggatcccg
gacgaggtgctcgaccagttgaaagtgaccaatgccgacttcaccgaggcgagaaaacat
gtcgacccgagtgcgatgcgggaggtgctggtcgaggtgccggacgtgaagtgggaggac
atcggcggactcgaacaggtgaagaaggacctgaccgagacggtggagtggccgctcaag
tacgcggacgtttttgagaagctcgagaccagtgccccgaaggggattctgctcttcggc
ccgccaggcaccggcaagacgatgctggcaaaggcggtcgccaacgagagccagtgcaac
ttcatctcggtgaaggggcccgaactcctctcaaagtgggtcggtgaatcagaaaagggg
gtcagggacatcttcagaaaggcccggcaggctgctccgtcgatcatcttcttcgacgag
atcgatgccctggtgccgtcgaggggatcctacacgggctcctcgcatgtgaccgagagt
gtggtcagccagatcctgaccgagctggacgggctcgaggaactgaagaacgtggtggtg
ctggcagccaccaacaggcccgacatgatcgacaaggcgctgatgcggccaggccggctc
gaccggcacctctacgtcccaccgccggacagggaggggaggaagaagatcttcgaggtc
tacctgcggcatgccgaggcgatcctctcaggggatgtgaagatcgacgatctggttgag
aagaccgagaggttcgtgggtgcagacatcgaggcactggtcagggaggcgaagctctca
gcgatgcgtgagttcatcggcgtaatgaccgggaagaccgaactggagaggaccgaagcg
atcgggaacgtcaggatcaccggaaagcattttgaggacgcactccttaaggtcaacgga
tccctggaccgcgatacgaccgagcagtccgaacggcagtcctgggagatcctcttcaac
caggaccagaggatgatccttgaggatgcggccgctgtcatcaagcgtgccgaactcaaa
gggatcggcaccacggtacctgatagccagaagagcgagatagaagatctcagaacagcg
ttatacagacagacgaaggacttcggtctgatcaaggagagaacagcacaggtgaagggg
caccttgacgggaccgggtga |
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