Methanosphaerula palustris: Mpal_1199
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Entry
Mpal_1199 CDS
T00823
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mpl
Methanosphaerula palustris
Brite
KEGG Orthology (KO) [BR:
mpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpl03016
]
Mpal_1199
Enzymes [BR:
mpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Mpal_1199
Transfer RNA biogenesis [BR:
mpl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mpal_1199
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GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ACL16537
UniProt:
B8GHD2
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All DBs
Position
1232176..1233732
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AA seq
518 aa
AA seq
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MNTVIVYMNDHHDVDLKGIAWNAMGKYGFSPEFPHSVIREVNAMDARLSQKSLMDVRDMR
SLLWSSIDNNDSLDLDQIEYCERRPDDEILVWIAIADVDRYVRRQLQTDLHAAHNGTSVY
TGIETFPMLPDRLSKGISSLLPGQDRMAIVIEYTVLPDGSTRHGEPYRALVTNRAKLIYE
EVGDWLEGTRGVPQTVRDIPGLDDQIRLQHEVTVRLQGYRREQGALVLNTVEAQPVVKGG
VVRDLVIQRQNQARCLIEEFMVAANGTLVDYLGRAGVPMIQRVVRVPKNWDGIVVTAARY
HQSLPRNPDAKALSKFLIRQKKADPERFPDLSLTIVKLLGAGEYMMLAPGSEPFGHFSLA
VTDYTHATAPNRRYVDIINQRLLKSVLDREPCPYTVDELVSLSTWLTGREKASKKVERFM
RKAVAAVLLHDRIGEHFAALVTGASEKGTYVRLISPPAEGRVLSGEGNLLVGQKITVRLV
RADPYSGFIDFACIGREASRTGPRAFSGHTVVPRRHTP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagtcatcgtgtacatgaacgatcaccacgatgtcgacctgaagggtattgca
tggaatgctatggggaagtatggtttctcccctgagttccctcattctgtcatcagggag
gtcaacgccatggatgcgaggctatcccagaagagtctgatggatgtcagggatatgcgg
tccctcctctggtcgtccatcgataataacgactcgctggatctcgatcaaatagagtac
tgcgaacgcaggccggatgacgagatcctggtctggattgcgatagcggatgttgatcgg
tatgtccggagacagttgcagaccgatcttcacgccgcccataatgggacctcggtctat
accgggatagagacctttccgatgctcccggaccggctctcaaaggggatatcatccctt
ctgcccggccaggaccggatggcgatcgtgatcgaatatacggttctcccggacggaagc
acccgtcatggcgaaccgtaccgggctctggtgaccaacagggcgaaactcatctacgaa
gaggtcggcgactggctggaggggactcgcggtgttccccaaacggtcagagatatcccc
ggtctggatgatcagatccgcctgcagcacgaggtaaccgtgcggctgcagggataccgg
agagagcagggggcactggtgctgaacaccgtcgaggcccagccggttgtgaaggggggc
gtggtcagggatctggtgatacagagacagaaccaggcgcggtgcctgatcgaggagttc
atggtcgcagccaacggaaccttggtggattatctggggagagccggcgtacccatgatc
cagcgggtcgtccgggtaccaaaaaactgggatgggattgtggtgacggctgcgcggtac
catcagtccctgccccgaaatccggatgcaaaggctctctcaaagttcctgatccggcag
aaaaaagcagaccctgaacgtttccccgacctctcgctgacaatcgtgaaacttctcggg
gctggagagtacatgatgctcgcaccgggtagtgaaccatttggtcacttctcgctggcc
gtcaccgactatacccatgctacagccccaaaccggcggtatgtcgacatcatcaatcag
cggctcctcaagtcggtcctcgatagagaaccatgcccatacacggtggacgaactggtc
tccctctccacctggttgaccggtcgcgagaaggcatccaagaaggtcgaacggttcatg
cgaaaggctgtggccgctgtgctcctgcatgacagaataggtgaacactttgcggcgctg
gtcaccggtgcctctgagaaaggtacctacgtcaggctcatctcacctccggccgagggg
agggtactatccggtgaaggcaatctcctggtcggtcagaagatcacggtccggctggtg
agggccgatccctacagcggtttcatcgactttgcatgcatcggcagagaagcgagtcga
actggaccgcgggcattctccggtcacacagttgtcccgcgccggcacaccccctga
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