Methanosphaerula palustris: Mpal_1699
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Entry
Mpal_1699 CDS
T00823
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mpl
Methanosphaerula palustris
Pathway
mpl03022
Basal transcription factors
mpl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mpal_1699
09124 Replication and repair
03420 Nucleotide excision repair
Mpal_1699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpl03021
]
Mpal_1699
03036 Chromosome and associated proteins [BR:
mpl03036
]
Mpal_1699
03400 DNA repair and recombination proteins [BR:
mpl03400
]
Mpal_1699
Enzymes [BR:
mpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mpal_1699
Transcription machinery [BR:
mpl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mpal_1699
Chromosome and associated proteins [BR:
mpl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mpal_1699
DNA repair and recombination proteins [BR:
mpl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mpal_1699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
AAA_22
DEAD
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACL17007
UniProt:
B8GJG6
LinkDB
All DBs
Position
complement(1759686..1761698)
Genome browser
AA seq
670 aa
AA seq
DB search
MTALDDWFPYSAYRPYQREMLETSAAIAAQGGIAMIDAPTGSGKSSVIAALLSESRGRKV
IVAVRTVSQLNTFIRELQLIRKKQRSLKFAYLVGKGSMCPLGGEGDVYRRCEGVKAFSSA
LMREQAQKGMLNPAKDPQIRNQIRRMDKEHPIICPYYINSRIFVQSEDLSLKMVPSGQLR
SRADRIGAEAVAPRQLHELCGDICPYEAMLHAARHADVVVLNYYHLFTDEIRDQLYTSLG
IESPGDVLLLIDEAHNCGDTVQSIQSVSLDDQSLELASHELAALRKHLNCVEPVEQVLPQ
ISNFMQALKRSTEIEDWFDPSIFNRMVIRGSLYRQIEEVVEDLQTITEFVREKNTKAGEY
KETAVEQLADFLYRIYRSSADPAFLTVFRRLEEERITLEVRNIDPADQLQTIARAHACCI
LISGTLSPVESYRRYYFGDLPVTTISLPNAFPSKNRLILCSTDITTAYSMRQSSGNLAAI
DDYIAAFATVKGNIAVYFPSYQLLETFAERCRRKVSGRTLFIEPKDSADAGAALKTFMDL
PRHGASGMMFAVCGGKWSEGLDYRGEMLSGALVIGLPLAPFNKVRKMVIDYFRHKFGEEG
EFISYTLPAINRATQALGRVLRTPEDRGVLVLGEKRFWEERVKSGLSPWMQQEMKPCDAS
TFREALKRWR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacttgacgactggttcccgtacagcgcgtacaggccctatcagcgggagatg
ctcgagacctctgctgctatagcggcgcagggggggattgcgatgatcgacgcacccacc
gggagcgggaagtccagtgtgattgcggcgctgctcagtgagagcagggggaggaaggtg
atcgtcgctgtccggactgtcagccagttgaacaccttcatccgggaactccaactgatc
cgaaagaaacaacgctccctgaaatttgcctatctggttggtaaggggtcgatgtgtccg
ctcggtggggaaggggatgtctatcgacggtgcgagggggtcaaggccttctcctcggca
ttgatgcgcgagcaggcccagaagggaatgctcaatccggcgaaggatcctcagatccgg
aaccagattcggcgtatggacaaggagcatccaatcatctgtccgtattatatcaacagc
aggatctttgtccagagcgaggatctctctctgaagatggtcccttccgggcaactccgt
tcccgggcagaccggattggagcagaagcagtcgccccccggcagcttcatgaactctgt
ggggatatctgcccgtacgaggcgatgctccacgcagccagacatgccgatgtcgttgta
ttgaactattaccacctgttcaccgatgagatccgtgaccagctgtatacatcccttggg
atcgaatcgcctggcgatgtgctgctgctgatcgatgaggcgcataactgcggtgacact
gtacagagcatccagagcgtttcgctcgatgaccaatctctcgaactggcctcgcatgaa
ctggctgcactccggaagcatctgaactgtgtggagccggtggaacaggtgctgccgcag
atctccaactttatgcaggccttgaaacggtccaccgagatagaggactggtttgatcca
tcgatcttcaatcggatggttattcggggatcgctgtaccgccagatcgaagaggtggtc
gaagacctgcagacaataaccgaatttgttcgggagaagaacaccaaggccggcgaatac
aaggagaccgcggtcgaacaactggccgatttcctctatcggatctatcgttcatctgca
gaccccgcattcctgaccgtcttccgacggctggaagaggaacggataacactcgaggtt
cggaacattgaccctgccgatcagttacagaccattgcccgggctcacgcctgttgcatc
ctgatcagtggaaccctttcaccagtggagagttaccggcggtattacttcggggatctg
ccggtgacaacgatctcgctgccgaacgcgttcccgtcgaagaacaggctgatcctctgc
agcaccgatatcaccaccgcgtatagtatgcgtcagagcagtggaaatctcgcagctatc
gatgactatatcgctgcatttgcgacggtcaaagggaacatcgctgtctacttcccctcc
tatcaactgcttgagacctttgccgagcggtgccggcgcaaggtctcgggtagaacgctc
ttcatcgagcccaaggactcggccgatgccggggccgcgctgaagacctttatggacctt
ccccgacatggggcttctggtatgatgtttgcggtctgtggtggcaaatggagtgaaggg
ctcgattaccgtggggagatgctgagcggggcactcgtcatcgggctcccactggcgccg
ttcaacaaggttcgaaagatggtgatcgactacttcaggcacaagttcggtgaggaggga
gagttcatctcgtacacgctccctgccatcaatcgggccacccaggccctcggtagggta
ttgaggacacctgaggatcgcggggtactggtgctcggcgagaaacggttctgggaggag
cgggtaaaaagcggtctttctccctggatgcagcaggagatgaaaccctgcgatgcttca
acatttcgagaggcactcaagagatggcgttga
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