Methanosphaerula palustris: Mpal_2442
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Entry
Mpal_2442 CDS
T00823
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpl
Methanosphaerula palustris
Pathway
mpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpal_2442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpl03019
]
Mpal_2442
03400 DNA repair and recombination proteins [BR:
mpl03400
]
Mpal_2442
Enzymes [BR:
mpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mpal_2442
Messenger RNA biogenesis [BR:
mpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mpal_2442
DNA repair and recombination proteins [BR:
mpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mpal_2442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
NA-iREase2
Helicase_Sgs1
Ribosomal_L17
HTH_36
BTRD1
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACL17720
UniProt:
B8GEL9
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All DBs
Position
2576542..2578362
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AA seq
606 aa
AA seq
DB search
MTPPEDLLKRYWGYSSFLPHQKEIIGSVLKGQDTLAIMATGGGKSLCYQLPALCLGGLTV
VVSPLISLMKDQVDDLNERGILAVAFNSSMEYRVRTKIEADLKNGKIRLLFVSPERCMQA
GFLDLIKAAPIRLIAVDEAHCISEWGHNFRPEYRQLAQLKKLFPAVPLVALTATAIPEVR
RDICQQLGISDAHEFVGSFNRKNLMYRVVEKKNPKILLLTFLSRHQHESGIIYCMSKKET
EEVARDLRRRGYNAQAYHAGLSKQVRTKVQDGFIKNTITIVCATIAFGMGIDKPDVRFVI
HYDIPKTVESYYQETGRAGRDGRPSECVLFYSRGDIARVRSMLEHDHMTERNLRASLRKL
QEMTEYCEAITCRRRFLLSYFGEESPDEHCTSCDNCNHPAARNDGTEPARLIVECVKELS
SNFGIDLITDLLRGSTCARIRDYHLDALAAYGTGKQYSKAQYRTWINELVRQGYLARTGD
RYLVIGMTDKGEDLLRGKNRVMLPAQEKMKTKTTKAPRARPAAEPVVTSARDTDLFLQLR
ALRRSIAEQGGIPPFMVFPDKTLREMARIRPCDRESFLQISGVGEVKVKRYGPAFIEVIR
GCSEES
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacccgaggacctgctgaagagatactggggctactcctctttcctcccacac
cagaaggagatcatcggatcggtgctgaagggtcaggacacgctcgcgatcatggccacc
gggggtggaaagtcgctctgttaccagctgccggccctctgcctcggtggcctgacggtg
gtcgtctcgccgctgatctcgctgatgaaggaccaggtcgacgacctgaacgaacggggg
atcctggcggtcgccttcaacagttcgatggagtaccgtgtccggacgaagatcgaagcc
gacctgaagaacggaaagatccggctcctcttcgtctctccggagcggtgtatgcaggcc
ggcttcctcgacctgatcaaagccgccccgatccggttgatcgccgtcgacgaggcgcac
tgcatctccgagtgggggcataacttccggccggaataccggcagctggctcaactgaag
aaactcttcccggccgtccccctcgtcgccctgaccgcgacggccatccccgaggtccgg
cgggacatctgccagcagctcggaatctcggacgcccacgagttcgtcggcagcttcaac
cggaagaatctgatgtaccgggtcgtcgaaaagaagaacccgaagattctcctcctcacc
tttctgagccggcaccagcacgaatcagggatcatctactgcatgagtaagaaggagacc
gaggaggtcgcccgcgatctccggcgacgggggtacaatgcacaggcctatcatgctggc
ctctcgaaacaggtcaggacgaaggttcaggacgggttcatcaagaacacgatcacgatc
gtctgtgccaccatcgcgttcgggatggggatcgacaagccggatgtcaggttcgtgatc
cattacgacatcccaaagacagtggagtcctactaccaggagaccggtcgggcagggcgg
gacggccggccgagcgagtgcgtcctcttctacagccggggggacatcgcacgggtccgc
tcaatgctcgagcatgaccacatgacagaacgaaacctccgggcctcgctccggaaattg
caggagatgaccgagtactgcgaggcgatcacctgccggcgccggttcctcctctcctac
tttggggaggagtccccggacgagcactgcacctcgtgcgacaactgcaaccacccggca
gcgaggaacgacggcacggaaccggcccgcctgatcgtcgagtgtgtgaaagaactctcc
tcgaacttcggtatcgacctgattaccgacctgttgcgcgggtcgacgtgcgccaggatc
agagactatcacctggacgcactcgctgcatacggaacagggaagcagtacagtaaggct
cagtaccggacctggatcaacgaactggtcaggcagggttacctggcacggaccggcgac
cggtatctggtgatcggcatgaccgacaagggcgaggatctgctgaggggaaaaaaccgt
gtgatgctgccggcccaggagaagatgaagacaaaaaccacaaaggccccgagggccaga
ccggccgcggaacctgtggtcacctcagcccgggataccgacctctttctccagctcaga
gccctccgccgctcgatcgccgagcagggagggataccgccgttcatggtcttccccgac
aaaaccctcagggagatggcccgcatccgaccctgtgaccgggagagtttccttcagatc
tccggcgtcggcgaagtgaaggtgaagcgatacggcccggccttcatcgaggtgatccgt
ggctgttctgaggaatcctga
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