Methanosphaerula palustris: Mpal_2660
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Entry
Mpal_2660 CDS
T00823
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpl
Methanosphaerula palustris
Pathway
mpl03410
Base excision repair
mpl03430
Mismatch repair
mpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mpal_2660
03430 Mismatch repair
Mpal_2660
03440 Homologous recombination
Mpal_2660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpl03400
]
Mpal_2660
DNA repair and recombination proteins [BR:
mpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mpal_2660
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mpal_2660
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mpal_2660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ACL17924
UniProt:
B8GFP1
LinkDB
All DBs
Position
complement(2787108..2788316)
Genome browser
AA seq
402 aa
AA seq
DB search
MSLGERAALIADHLRKQEYVEVYGHHDADGIAAAAILCHGLYRLGIGFRLRIAGSLPALA
EDPEQPVILCDMGSGSAGLPDQTIVIDHHTPGFPGAYHLNPNLFGLDGEQVLPASGCAYL
VASALGDNRDLAGLALLGMIGDHQQMEGPNRDIFNEGVGNSVVSPERGLLLPGRTREEQL
LLATSPYLAGISGDEETVKQIIADEGEQGSEEPLLSAIVFAAAEQASPAALDRVYGDQYG
LQREVIEDGHTLAAVIDGCGKAGMGGLAASLCLRSAVSIAEAWAVTARFRQQVIAAINGR
EQIGDWAGCYMVPDSALVGDVADALQCDLPSGDLVVVVAAEGPTSRLSVRTPQTREIDLG
RLLADLALDYGGTGGGHRHRGGATIRSAAVPGFLEQLTEALV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgggggagagggcagcgctgatcgccgatcatctgcggaaacaggagtatgtc
gaggtgtacgggcaccatgatgcggatgggatagccgcagcggcgatcctctgccatggg
ctctaccggctcggcatcgggttccggctcaggatagctggcagcctccctgcactcgct
gaggatccggagcagccggtcatcctctgtgatatgggatccggcagcgcaggcctcccc
gaccagacgatcgtgatcgaccatcacacacccgggttcccgggggcctatcacctgaac
ccgaacctcttcgggctcgatggtgagcaggtcctcccggcgtcagggtgtgcgtatctg
gtcgcctccgccctcggggacaaccgcgacctggcgggacttgcactgctcgggatgatc
ggtgatcatcagcagatggaaggaccgaaccgggatatcttcaatgaaggggttggcaac
agcgtggtctcgccggagcgtggcctcctcctcccgggtcggacccgggaagagcagttg
ctactggccacctcgccgtacctggccgggatcagcggcgatgaggagacggtcaaacag
atcatcgcagatgagggagagcaggggtcagaggaacccctcctctcggcgatcgtcttt
gcggctgcagaacaggcatctcccgcagcccttgatcgggtctatggggatcagtatggt
ctccagcgggaggtgatcgaggacggtcacaccctggcggctgtgatcgacgggtgcggc
aaggccgggatgggggggctcgcagcctccctctgcctcaggtccgccgtttcgatcgcc
gaggcatgggctgtcactgcccgcttccgacaacaggtgatcgcagcgatcaacggacgc
gaacagatcggcgactgggccggctgttatatggtgcctgattcggcgctcgtcggagat
gtggccgacgccctccagtgtgatctgccctcaggtgacctggtcgtcgtcgtggcagca
gaagggcctaccagtcgtctgtcagtcagaacaccacagacgagggagatagacctcggc
cggctgctcgctgaccttgccctcgattatgggggcacgggcggcggtcaccgccaccgc
gggggtgcgaccatcaggtctgcagctgttcccggctttctcgaacagttgacggaggcc
ctggtatga
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