Pseudoduganella plicata: E1742_00520
Help
Entry
E1742_00520 CDS
T06563
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E1742_00520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_00520
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E1742_00520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
CENP-B_dimeris
Motif
Other DBs
NCBI-ProteinID:
QBQ34836
UniProt:
A0A4P7B8P3
LinkDB
All DBs
Position
complement(123546..124688)
Genome browser
AA seq
380 aa
AA seq
DB search
MARSLWKGAISFGLVHIPVELYSAIKQNELDLTMLDKRDFSPIGYKRYNKSNNKEVTWDH
IIKGYEYADGEYVVLSDEDLRQANVKATQTIDIQAFVDAEDVPLTYYETPYYLAPGRGGA
KVYALLRETLRRAGKIAIATVVIRTKQHLCALVAAEDGIIMNTLRYADEIRDTEGLDLPE
KGMKATGIKEKELEMALSLVEGMSEEWAPEQYHDTYKDDVLALVEKKIKAKQTKTITMPS
KDGDEEAPSSNVIDLVALLKQSLGAKPGKGKAAQAAEEEEEEEQTDEADEDSDDDEPPPK
ARRPVPRGSAGSVNARSSGSTGSASKSTATAKAKGSPAKAAASKTVAKKAAAKPAAKPAA
KKAVAKPAASKSSSTRRKAA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcacgctcgctctggaaaggcgccatcagtttcggactggtccacatcccggtcgag
ctgtactcggccatcaagcagaacgagctcgatctgacgatgctcgacaaacgcgacttc
tcgcccatcggctacaagcgctacaacaagtcgaacaacaaggaagtcacgtgggaccac
atcatcaagggctacgaatacgcggacggcgaatacgtggtgctgtcggatgaagacctg
cgccaggccaacgtcaaggccacgcagacgatcgacatccaggcatttgtcgatgccgag
gatgttccgctgacgtactacgagacgccctactacctggcgccaggccgcggcggcgcg
aaggtctatgccttgctgcgcgaaacgctgcgccgggccggcaagatcgccatcgccact
gtggtcatccgcaccaagcagcacctgtgcgcactggtggcggccgaagacggcatcatc
atgaacaccttgcgctacgcggacgagatccgcgacacggaaggcctggacctgccggaa
aaaggcatgaaggccaccggcatcaaggaaaaggaactggaaatggcgctctcgctcgtg
gaagggatgagcgaggaatgggcgccggagcagtaccacgacacctataaagatgatgtg
cttgccctggtcgaaaagaagatcaaggcgaagcagaccaaaacgatcacgatgccgtcc
aaggacggcgacgaggaagcgcccagctcgaacgtcatcgacctggtcgcgctgctgaag
cagtcgctcggcgccaaacccggcaagggcaaggcggcgcaagcggccgaggaggaggag
gaggaggagcagaccgacgaggcggacgaggactcggacgacgacgaaccgccgccgaag
gcacgccggccggtgccgcggggcagtgccggcagcgtgaatgcccggagcagcgggtcc
acgggttccgccagcaagagcactgctaccgccaaggccaagggcagcccggccaaggcc
gccgcgtcgaaaacggtggcgaagaaggccgcggcaaagcctgcagccaagccggcggct
aagaaggcggtcgccaagccggccgcatcgaagtcctcgagcacgcgccgcaaggccgca
tga
DBGET
integrated database retrieval system