KEGG   Pseudoduganella plicata: E1742_00520
Entry
E1742_00520       CDS       T06563                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
mpli  Pseudoduganella plicata
Pathway
mpli03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mpli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    E1742_00520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpli03400]
    E1742_00520
DNA repair and recombination proteins [BR:mpli03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     E1742_00520
SSDB
Motif
Pfam: Ku CENP-B_dimeris
Other DBs
NCBI-ProteinID: QBQ34836
UniProt: A0A4P7B8P3
LinkDB
Position
complement(123546..124688)
AA seq 380 aa
MARSLWKGAISFGLVHIPVELYSAIKQNELDLTMLDKRDFSPIGYKRYNKSNNKEVTWDH
IIKGYEYADGEYVVLSDEDLRQANVKATQTIDIQAFVDAEDVPLTYYETPYYLAPGRGGA
KVYALLRETLRRAGKIAIATVVIRTKQHLCALVAAEDGIIMNTLRYADEIRDTEGLDLPE
KGMKATGIKEKELEMALSLVEGMSEEWAPEQYHDTYKDDVLALVEKKIKAKQTKTITMPS
KDGDEEAPSSNVIDLVALLKQSLGAKPGKGKAAQAAEEEEEEEQTDEADEDSDDDEPPPK
ARRPVPRGSAGSVNARSSGSTGSASKSTATAKAKGSPAKAAASKTVAKKAAAKPAAKPAA
KKAVAKPAASKSSSTRRKAA
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggcacgctcgctctggaaaggcgccatcagtttcggactggtccacatcccggtcgag
ctgtactcggccatcaagcagaacgagctcgatctgacgatgctcgacaaacgcgacttc
tcgcccatcggctacaagcgctacaacaagtcgaacaacaaggaagtcacgtgggaccac
atcatcaagggctacgaatacgcggacggcgaatacgtggtgctgtcggatgaagacctg
cgccaggccaacgtcaaggccacgcagacgatcgacatccaggcatttgtcgatgccgag
gatgttccgctgacgtactacgagacgccctactacctggcgccaggccgcggcggcgcg
aaggtctatgccttgctgcgcgaaacgctgcgccgggccggcaagatcgccatcgccact
gtggtcatccgcaccaagcagcacctgtgcgcactggtggcggccgaagacggcatcatc
atgaacaccttgcgctacgcggacgagatccgcgacacggaaggcctggacctgccggaa
aaaggcatgaaggccaccggcatcaaggaaaaggaactggaaatggcgctctcgctcgtg
gaagggatgagcgaggaatgggcgccggagcagtaccacgacacctataaagatgatgtg
cttgccctggtcgaaaagaagatcaaggcgaagcagaccaaaacgatcacgatgccgtcc
aaggacggcgacgaggaagcgcccagctcgaacgtcatcgacctggtcgcgctgctgaag
cagtcgctcggcgccaaacccggcaagggcaaggcggcgcaagcggccgaggaggaggag
gaggaggagcagaccgacgaggcggacgaggactcggacgacgacgaaccgccgccgaag
gcacgccggccggtgccgcggggcagtgccggcagcgtgaatgcccggagcagcgggtcc
acgggttccgccagcaagagcactgctaccgccaaggccaagggcagcccggccaaggcc
gccgcgtcgaaaacggtggcgaagaaggccgcggcaaagcctgcagccaagccggcggct
aagaaggcggtcgccaagccggccgcatcgaagtcctcgagcacgcgccgcaaggccgca
tga

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