Pseudoduganella plicata: E1742_00915
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Entry
E1742_00915 CDS
T06563
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00040
Pentose and glucuronate interconversions
mpli01100
Metabolic pathways
mpli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
E1742_00915
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E1742_00915
Enzymes [BR:
mpli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
E1742_00915
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QBQ39207
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Position
207073..208320
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AA seq
415 aa
AA seq
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MSGNVACTTATFGTDPNPRQTKKCAVGPVGSTTPTPTPTPTPTPAPQAAAEASTEAAPST
GWASRNGGTTGGKAAPSTAVYKVSSPSQLLAALKAQGDNPKIIKLYGTIDMAAADNGGPF
KSTSDQALRSQIKVGSNSTLIGTGSDTRLVNGTISISGVQNVIVRNLTIVNPCDVSPVWD
PNDGSSGNWNSEFDSVVISKSKNVWVDHNVFTDAPITDDTLPVANGKVKQCHDGALDVKN
GSDYVTVSNNRFELHTKNNLIGSSDSTTSDAGHLTVTFNNNHFLNVSERAPRVRFGMVHI
YNNYFEGSRSHKVYPHHYSIGVGYQAKIISQNNAFDIAGASTCTQVLNNPGSSSKTGAIV
DTGSLINGAALDAANKCSFSSAVGWTVPYSVTPLSASAVQAAVLGNAGTGKLTVR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ctgtccggcaatgtcgcctgcacgaccgcgacgttcggtaccgatccgaacccgcgccag
accaagaagtgcgccgtcggaccggtaggcagcacgaccccgaccccgaccccgaccccg
acgccgacgcctgcgccgcaggcggccgcggaagccagcacggaagccgccccatcgacg
ggttgggccagccgtaacggcggcaccacgggcggcaaggctgcgccatcgacggccgtc
tacaaggtcagctcgccttcccaactgctggctgcgctgaaggcgcagggcgataacccg
aaaattatcaagctgtacggcacgatcgacatggcggcggccgataacggcggcccgttc
aagagcaccagcgaccaggccctgcgcagccagatcaaggtgggcagcaacagcacgctg
atcggcacgggcagcgacacgcgtctcgtcaacggcaccatttcgatttcgggcgtacag
aacgtcatcgtgcgcaacctgaccatcgtcaacccttgcgacgtcagcccggtctgggac
ccgaatgacggcagctcgggcaactggaactcggagttcgacagcgtcgtcatcagcaag
tcgaaaaacgtctgggtcgatcacaacgtcttcaccgacgcgccgatcaccgacgacacg
ctgcccgtcgccaacggcaaggtcaagcagtgccacgacggcgcgctggacgtcaagaac
ggctcggactacgtcaccgtatcgaacaaccgtttcgagctgcacacgaagaacaacctg
atcggctcttccgacagcacgaccagcgatgccggccacctgaccgtcacgttcaacaat
aaccacttcctgaacgtatcggaacgggcgccgcgcgtgcgtttcggcatggtgcacatc
tacaacaactacttcgaaggcagccgctcgcacaaggtctacccgcatcactacagcatc
ggcgtcggctaccaggccaagatcatttcgcagaacaacgcgttcgatatcgccggcgcg
tccacctgcacgcaggtcctgaacaacccgggttcttccagcaagacgggcgcgatcgtc
gatacggggtcgctgatcaacggcgcggcgctggacgcagccaacaagtgcagcttcagc
tcggccgtgggctggaccgtgccttactcggtgactccgctgtccgcttcggccgtccag
gctgccgtactgggcaatgccggcaccggcaagctgacggtgcgttaa
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