Pseudoduganella plicata: E1742_01180
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Entry
E1742_01180 CDS
T06563
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
E1742_01180
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA
AAA_16
GvpD_P-loop
nSTAND3
AAA_19
AAA_22
AAA_24
Rad51
IstB_IS21
MEDS
DEAD
SLFN-g3_helicase
DnaB_C
AAA_7
PAXNEB
AAA_30
AAA_29
PhoH
TrwB_AAD_bind
SRP54
CbiA
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QBQ34945
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Position
286255..287772
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AA seq
505 aa
AA seq
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MSSTLSTSRAERAPTRRMPTGVPGLDEILCGGLTAERVYLIEGSPGTGKTTLGLQFLLDG
IARGDSGMYITLSETADELDAVAHSHGWSIDGIHVFELANDGALDPAVMQSVLHSAEVEL
GETTRGVMEQVSAVKPARVVFDSLSELRLLAQNPLRYRHQILALKQFFAARACTVLLLDD
KSSQSDQHLHSIAHGVISLEQIAQEFGRERRRVNVIKMRGIAFRGGFHDYVLNTGGITMF
PRLIAAEHVEHFTPVVRSTGSAGLDHLLGGGLVAGTNTLVVGPAGVGKTTVTVRCMLAAL
ERGEKAAVYLFDEGLGTFYARARALGMDLRSYVASGALTVRHVDPAEMAPGQFASALQDA
VEKDDIRFVVIDSLNSYLQAMPGEQYLVLQMRELLSYLNLKGVTTALILGEHGMVGEIRR
DVDLSYLSDATILLRFFEAGSELRRAITVAKSRTENHAMTIHEMRLHAGGVDVGAPLLGF
EGILTGVASYRGNTTLMDMGGDGKR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagttctactttatcgaccagccgcgccgagcgcgcgcccacccgccgcatgccgacc
ggcgtgccggggctcgacgaaatcctgtgcggcggcctgacggccgagcgcgtatatctg
attgaaggctcgcccggcaccgggaagacaacgctgggcctgcagtttttgctcgacggg
atagcgcgcggcgattcgggcatgtacatcaccctgtccgagacagcggacgaactcgac
gccgtcgcgcatagccacggctggtcgatcgacggcatccacgtgttcgaactggccaac
gacggcgccctggaccctgcggtcatgcagtccgtgctgcattcggccgaggtggaactg
ggcgagacgacgcggggcgtgatggaacaggtcagcgccgtcaagccggcccgggtggtg
ttcgacagcctgtcggaactgcgcctgctggcgcagaatccgctgcgctaccgccaccag
atcctggcgctgaagcagttcttcgcggcccgcgcctgcaccgtcctgctgctggacgac
aagagcagccagtccgaccagcacctgcacagtattgcccatggtgtcatcagcctggaa
cagattgcccaggagttcggccgcgagcgccggcgcgtgaacgtcatcaagatgcgcggc
atcgcgttccggggcggcttccatgattacgtgctcaacaccggcggcatcacgatgttc
ccccgcctgatcgcggccgagcacgtggaacatttcacgccggtggtgcgctcgacgggc
tccgcaggcctggaccacctgctgggcggcggactggttgccggcaccaatacgctggtt
gtcggccccgccggcgtcggcaagaccaccgtcaccgtgcgctgcatgctggcggcactg
gagcggggcgagaaggcggcggtttacctgttcgacgaaggactgggaacgttctatgcc
cgcgcccgcgcgctggggatggacctgcgcagctatgtcgccagcggcgcgctgacggtg
cggcacgtcgacccggccgagatggcgcctggccagttcgccagcgccctgcaggacgcg
gtcgagaaggacgacatcaggttcgtcgtcatcgacagcctgaactcttatctgcaggca
atgccgggcgaacaatacctggtgctgcagatgcgcgagctgctcagctacctgaacctg
aaaggcgtgacgaccgcgctgattctgggcgaacacggcatggtgggcgagatccgccgc
gacgtcgatctcagctatctgagcgatgccacgatcctgctgcgctttttcgaggcgggc
agcgaactgcggcgcgccatcaccgtcgccaagagccggaccgaaaaccacgcgatgacg
atccatgagatgcggctgcacgccggcggtgtcgacgtcggcgcgccattgctgggcttc
gagggcattctgacgggcgtggcgtcgtatcgcggcaatactacgctgatggatatgggt
ggcgatggcaagcgctag
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