KEGG   Pseudoduganella plicata: E1742_01820
Entry
E1742_01820       CDS       T06563                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
mpli  Pseudoduganella plicata
Pathway
mpli03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mpli00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E1742_01820 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mpli02044]
    E1742_01820 (tssM)
Secretion system [BR:mpli02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E1742_01820 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QBQ35049
LinkDB
Position
430574..434125
AA seq 1183 aa
MKRLLHWLVKPAVFSLLGVLVLSLVVWFEAPLLAFDGAEPFATDRARWIIIAVLLLAWAG
WFGWKKLALRLAERRLARAVSADAKAATTQPEHSKSSENSVEVALLSQRFQEALATLRKA
RKPGGLYGLPWYLFVGAPGTGKTTALVHSGLKFPLADTHGRGPVQGVGGTRNCDWWFTDE
AVLLDTAGRYTTQDSHAEMDNAAWLGFLRLLRRQRRRRPVDGVIVALSVADLLERDDAAR
RAQARTVRARIQELHNELGVRFPVYAVVTKCDLLAGFVEYFDGLTREERMQVWGVTFAHQ
AGDAPDAGLKSFPAEFAALAAQLQAPLFERMQGERDVQRRALIYNFPQQFAAVEAPLQAF
LDDVFDTTGYEQAALLRGVYFTSGTQEGSPIDRVMAALAASFGLDRKVLPPAIATGRSYF
LTRLLRDVIFAEQGLAGSNLAIERNRGRLQWAAIGAAALALLLATAGLATSYVHNAGYVA
DVAARAAEIDRLARAVPDDLSPLVTLPLLNASRDVPGGYRDRATDVPLLMGLGLYQGAKL
GDGAVRAYQRFLRAALLPRLMTRMETQLRRGNANSPDYLYELLRVYLMLGQPNHLDAQAV
GAWLDLDWQRNLAAASEPQRSELADHVAALLDESYALDAPPQLDTALIERTRLLLAAAPL
GERVYRRLQRDLMTAAPPDFDVAAAAGRDAPVVLKRQSGQPLTRGVSGLYTVAGYKRFMA
AIDAGIADIVRDSWVLDRREAVDGLAAAAQMKASVQELYYDDYIRQWDGLLADVVLVPFD
SLDGAARVLALASGANSPLRRYLQAVAFQTALEKQAAPPSALDAAGAKVKGLGDAARKRL
ASALGGGAAAPAPTARPMNPVDAHFAPLHRMLVAGAAGTPAPLETVLAQLKDVAVYLDAA
NAARAAGQPPPPADSLARLRPVGADLPAPLAALVREVEGAGNALTLGTERERINALWQAG
PAPFCRGAIAGRYPVVRASAQDALPEDFGRFFAPGGMMDDFFQKYLLAYVDMSAPQWRWR
IVNNVELGIDAEVLAQFQRAATIRDRYFGAGGRQPSIRFDLRPVAADAALTRVALDIDGQ
VLAFAPKAPLTGVSFQLPSGKNVNAVRFDVAPPSTLELRTEGPWAWFRMLDKAVVEPSPQ
QPERYKLTFDLEGRRMIYELVASSVNNPFRRDGTDGFRCLEGL
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgaagcgcctgctgcactggctggtgaagcccgccgtcttctcgctgctcggcgtcctg
gtgctgtcgctcgtcgtctggttcgaggcgccgctgctggcgttcgacggcgccgagccg
ttcgccaccgaccgggcgcgctggatcatcattgccgtcctgctgctggcgtgggcgggc
tggttcggctggaagaagctggcgctgcggctggcggagcggcgcttggcgcgtgccgtc
tcggccgacgcaaaggcggccaccacgcagccggaacatagcaagagcagcgaaaacagc
gtcgaggtggcgttgctgtcgcaacgcttccaggaagcgctggcaacgttgcgcaaagcg
cgcaaaccgggtgggctatatggcctgccgtggtacctgtttgtcggcgcgcccgggacg
ggcaagaccaccgcgctggtgcactcggggctgaaattcccgctggccgacacgcacggc
cgcggccccgtacagggtgtgggcggcacgcgcaactgcgactggtggttcacggacgaa
gccgtgctgctcgacacggcggggcgctatacgacgcaggacagtcacgcggaaatggac
aacgccgcgtggctgggcttcctgcggctgctgcggcgccagcgccggcggcgccccgtc
gatggcgttatcgtcgcgctgtccgtcgccgacctgctggagcgggacgacgcggcgcgc
cgcgcccaggcgcgcacggtgcgcgcccgcatccaggagctgcacaacgaactgggcgtg
cgttttcccgtgtatgcggtcgtgacgaagtgcgacctgctggccggattcgtcgagtat
tttgacgggctgacccgcgaggagcgcatgcaggtgtggggggtgacgttcgcgcaccag
gcgggcgacgcgccggatgcgggcctgaaaagcttcccggccgagttcgcggcgctggcg
gcgcagctgcaggcgcccctgttcgagcgcatgcagggcgagcgcgacgtgcagcggcgc
gcgctgatctacaacttcccccagcagttcgccgccgtcgaggcgccgttgcaggcattc
ctggacgatgtattcgacaccacgggatacgaacaggcggcgctgctgcgcggcgtctac
ttcaccagcggcacgcaggaaggcagcccgatcgaccgcgtgatggccgcgctggcggcc
agcttcggcctcgatcgcaaggtgctgccgcccgcaatcgccacgggccgcagctatttc
ctcacccggctcttgcgcgacgtgatcttcgccgagcaggggctggcggggtcgaacctg
gcgatcgagcgcaaccggggccggctgcaatgggccgccatcggcgccgccgcactggcg
ctgctgctggccaccgccggcctggcgacgagctacgtgcacaacgccggctacgtggcc
gacgtcgcggcacgggcggcggagatcgatcggctggcgcgggcagtgccggacgatctg
tcgccgctcgtcacgctgccgctgttgaacgcttcgcgcgacgtgccggggggataccgt
gaccgcgcgacggacgtgccgctgctgatgggcctcggcctgtaccagggcgccaagctg
ggcgacggcgcagtgcgcgcctaccagcgcttcctgcgggcggcgctgctgccgcgtttg
atgacgcggatggaaacccagctgcgccgcggtaacgccaacagcccggactacctgtac
gaactgctgcgcgtctacctgatgctgggccagccgaaccatctggatgcgcaggccgtc
ggcgcgtggctcgacctggactggcagcgcaacctggccgccgccagcgagccgcaacgc
tcggaactggccgaccatgtcgcggcgctgctggatgaatcgtatgcactggatgcgccg
ccccagctggacacggcgctgatcgagcgtacccgcctgctgctggcggcagcgccgctg
ggcgagcgggtgtatcgccgcctgcaacgcgacctcatgactgccgcaccgcccgacttc
gacgtggccgctgcggcaggacgcgatgcgccggtagtgctgaagcgccagagcggccag
ccgttgacgcgcggcgtgtcggggctgtacacggtggcaggctacaagcgcttcatggcg
gcgatcgacgccggtatcgccgacatcgtgcgcgacagctgggtgctggaccggcgcgag
gccgtggacggactggcggcggccgcgcagatgaaggcttcggtccaggaactgtattac
gacgactacatccgccaatgggatggcttgctggccgatgtcgtgctggtaccgttcgac
agcctcgatggggcggcgcgcgtactggcgctggccagcggtgccaattcaccgctgcgt
cgctacctgcaggccgtggccttccagaccgcgctggagaagcaggccgcgccaccgtcg
gcgctcgatgcggcgggcgcaaaggtgaaggggctgggcgacgcggcgcgcaagcgtctt
gcgtccgcgctgggcggtggcgccgcggcgccggcgccgacggcccggccgatgaatcct
gtcgatgcgcacttcgcgccgctgcaccggatgctggtggccggcgcggcaggtacgccg
gcccccctggagacggtgctggcgcagctgaaggacgtcgctgtctacctggacgcggcc
aatgcggcgcgtgccgcgggccagccgccaccgccggcggattcgctggccaggctgcgg
cccgtcggggccgacctgccggcgccgctggcggcactggtgagggaggtcgagggcgct
ggcaatgcgctgacccttggcacggagcgcgagcgcatcaatgcgctttggcaggccggc
cctgcgccgttctgccgcggcgccatcgccggccgctaccccgtcgtccgcgcatccgca
caggatgcgctgcccgaggacttcggccgtttcttcgcgcccggcggcatgatggacgac
ttcttccagaagtatctgctggcgtacgtggacatgtcggccccgcagtggcgctggcgc
attgtcaacaacgtcgaactgggcatcgatgcggaggtgctggcgcagttccagcgcgcc
gccaccatccgcgaccgctacttcggcgccggcggacggcagccgtcgatccgcttcgac
ctgcgccccgtcgcggccgatgcggcgctgacgcgggtggcgctggatatcgacggccag
gtgctggccttcgctcccaaggccccgttgaccggcgtgtcgttccagctccccagcggc
aagaacgtcaacgcggtgcgcttcgacgtggcgccgccgtcgacgctggaactgcgcacg
gaagggccgtgggcttggttccgcatgctggacaaagccgtcgtcgaaccgagcccgcaa
cagccggagcgctacaagctgaccttcgacctggaaggacgcaggatgatctacgagctg
gtagccagcagcgtcaacaaccccttccggcgcgacggcaccgatggcttccgctgcctg
gagggactgtga

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