Pseudoduganella plicata: E1742_03175
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Entry
E1742_03175 CDS
T06563
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpli03032
]
E1742_03175
03036 Chromosome and associated proteins [BR:
mpli03036
]
E1742_03175
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_03175
DNA replication proteins [BR:
mpli03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E1742_03175
Chromosome and associated proteins [BR:
mpli03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E1742_03175
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E1742_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_bac_1
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
QBQ35280
LinkDB
All DBs
Position
complement(761870..762142)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHIATSADISKAAAARALDAMIDGVTTTLAKNDSVTLVGFGTFMVSERAARTG
RNPRTKEEITIEAAKVPKFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagactgaactgatcgaccatatcgccacttccgctgacatctcgaaagcggcc
gcggcacgcgcgctggacgcgatgatcgatggcgttaccactactctggccaagaacgac
agcgtgaccctcgtcggcttcggcaccttcatggtgagcgagcgcgcagcccgtaccggc
cgcaacccgcgcaccaaggaagagatcacgatcgaggccgccaaagtgccgaaattcaaa
gctggtaaagcactgaaagatgctgtaaactaa
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