Pseudoduganella plicata: E1742_04245
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Entry
E1742_04245 CDS
T06563
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mpli02022
]
E1742_04245
Two-component system [BR:
mpli02022
]
NtrC family
Unclassified
E1742_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
HTH_8
bpMoxR
HTH_23
AAA
HTH_30
HTH_17
HTH_22
HTH_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QBQ35462
LinkDB
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Position
998558..1000081
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AA seq
507 aa
AA seq
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MLRSPHAWTTMTDRDLTLTSPCTSHDSQWAALLALTIVWHPDQARIGAQFVWAPGTPIDI
CRYAPLFHPPGGAGLPLGHERVSRSPLRLLPDHRDGEPGLMIALPDSRMTVELNGRPITG
GTILDGATLRDSPILTVGRAVVLCLHWMRGLPKVNPVPGLVGVGSGAIEVRDQIRMVAAT
DLPVLLLGETGTGKEIAARGIHALSRRHQGRLVTVNMAALNESLAAVELFGAAKGAYTGA
QADRGGLFAEADGATLFLDEIGNAPASVQPMLLRVLEGGDYRPVGGGRDRRSTARLIAAT
DQRLGNGEFNQALLRRLEQFVIELPPLRQRREDIGVLIVHLLATQESAPPLPVEFVTALA
CHAWPGNIRQLAHVLRRALLQSRHGVAPQLQALVRDGAPTPASAPPERASAEPAARKRRP
AELTEQELLDAMAGNAWIIQAAAQALHISRPTLYKLLKGHSAIRPAERIPADEIRQALGA
CDYDLARCAQLLRTPLEPLRRHLRQLP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctacgatccccgcatgcctggacgaccatgaccgaccgcgacctcacactgacttcc
ccgtgcaccagccacgacagccagtgggcggcattgctggcgctcaccatcgtctggcac
cccgaccaggcgcgtatcggcgcacaattcgtctgggcgccgggcacgccgatcgatatc
tgccgctatgcgcccctgttccatccgcccggtggcgcgggcctgccgcttggccacgaa
cgtgtctcccgatcgccgctgcgcctgttgcccgaccaccgcgacggcgaacccggcctg
atgatcgcgttacccgacagtcgcatgaccgtcgagctgaacggccggccgattaccgga
gggaccattctggatggggcgacgctgcgcgacagccccatcctgacggtaggccgcgcg
gtcgtcctgtgcctgcactggatgcgcgggctgcccaaggtcaatccggttccgggcctg
gtcggcgtcggcagcggtgcaatcgaggtgcgcgaccagattcgcatggtcgcggccacc
gatctgccggtactgctgctgggcgagacgggcaccggcaaggagatcgccgctcgcggc
atccacgcgctgagccggcgccaccagggtcggctggtcaccgtcaacatggcggcgctg
aacgagtcactggctgcagtggagctgttcggcgccgccaagggagcttacaccggcgcc
caggcggatcgcggcggccttttcgccgaagcggacggcgccacgctgttcctcgatgaa
atcggcaatgcgcccgccagcgtgcaaccgatgctgctgcgggtactggagggtggcgat
tatcgacccgtcggcggtggccgtgaccgccgcagcaccgcccgcctgatcgcggcaacg
gaccagcggctcggcaacggcgaattcaaccaggcgctgctgcgccgcctggaacagttt
gtcattgaattgccgcccctgcgccagcggcgcgaagatatcggcgtgctgatcgtccat
ctgctggcaacgcaggaaagcgcgccgccattgccggtcgaattcgtcaccgcgctggcg
tgccacgcctggcccggcaatatccgccagctggcacacgtgctgcggcgcgccctgttg
cagtcgcggcacggcgtggcgccgcaattgcaggcgctggtgcgcgacggggcgccgacg
ccagcatccgcaccgcccgagcgcgcgagtgcggaaccggccgcccgcaagcggcgcccc
gccgaactgacggagcaggaactgctggacgccatggccggcaatgcctggatcatccag
gcggccgcgcaggcactgcacatctcgcgtcccacgctgtacaagctgctgaagggccac
agcgcgatccgaccggccgagcgcattccggccgatgagatccggcaggcgctgggcgcc
tgcgactacgatctggcgcgctgcgcccagctgctgcgaacgccgctggaaccgctgcgg
aggcacctgcgccagctgccgtaa
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