Pseudoduganella plicata: E1742_05600
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Entry
E1742_05600 CDS
T06563
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
mpli
Pseudoduganella plicata
Pathway
mpli02020
Two-component system
mpli02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E1742_05600
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E1742_05600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpli03021
]
E1742_05600
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mpli02035
]
E1742_05600
Transcription machinery [BR:
mpli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E1742_05600
Bacterial motility proteins [BR:
mpli02035
]
Flagellar system
Flagellar assembly proteins
Stator
E1742_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QBQ35699
UniProt:
A0A4P7BEF5
LinkDB
All DBs
Position
1296911..1297681
Genome browser
AA seq
256 aa
AA seq
DB search
MAFVATENTTESYGESYGESYGEAFAATSAAAAMSPAAEQKHLLAYAPLVKKIVRQLNSQ
VGGAIDREDMEQIGLMGLLEALRRYGEPDVGFGSYASLRVRGAILDELRRQDWRPRSVRQ
QSHKLRDAVRALTRKLGREPTEQEAVAGLGITADEYLTYQLDEGAEVMASFDDLLQDQTA
DSGAGSTPGPEEALMVRRSLEQALTGLNEREQRVVQMYYEFELSYKEIAAVLDLTDARVC
QLNKAALNKMKAVLQA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtagcgaccgaaaacaccacggaaagctatggcgagagctatggcgaaagc
tacggcgaggcgttcgccgcaaccagtgcggccgcggcgatgagcccggccgcggaacag
aaacacctgctggcgtacgcgccgctggtgaagaaaatcgtgcgccagctgaactcccag
gtgggcggcgccatcgaccgcgaggacatggagcagatcggcctgatgggtctgctcgaa
gcgctgcgccgctatggcgagccggacgtgggtttcggcagctatgccagcctgcgcgta
cgcggcgccattctggatgagctgcgccggcaggactggcgtccgcgttccgtgcgccag
caaagccacaagctgcgcgacgccgtgcgggcgctgacgcgcaagctggggcgcgagccg
accgaacaggaagccgtggcgggcctgggcatcaccgccgacgaatacctgacctaccag
ctcgacgaaggtgccgaggtcatggccagcttcgacgacctgctgcaggaccagaccgcc
gacagcggcgccggcagcacgcccggcccggaagaggcgctgatggtccggcgcagcctg
gagcaggccctgacgggcctgaacgagcgcgaacagcgcgtcgtgcagatgtattacgag
tttgagctgagctacaaggaaatcgcggccgtgctggacctgacggatgcgcgcgtgtgc
cagctgaacaaggcggcattgaacaagatgaaagccgtgctgcaggcgtaa
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