Pseudoduganella plicata: E1742_05770
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Entry
E1742_05770 CDS
T06563
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E1742_05770 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_05770 (recC)
Enzymes [BR:
mpli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E1742_05770 (recC)
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E1742_05770 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBQ35726
LinkDB
All DBs
Position
complement(1330141..1333533)
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AA seq
1130 aa
AA seq
DB search
MTSPISPGLLILHGNQLEQLRAAVFGWLRGHPLDPLETDILLVQSNGVAEWLKIALAEEM
GVCAATRVALPARFLWQAYRAMLGRERVPRVSAFDKGPLTWRLMLLLPALLADETFAPLR
HFLADGDPDRRLQLAERLSDLFDQYQVYRADWLADWAAGRDLMRCPRGIEYPLPEGQRWQ
AALWRAIVASVPEEERALGRASVHTAFVRAVESGAQPVAALPRRVVLFGVSALPYQTLQA
LASLARFTQVIVAVPNPCRYYWGDIIDGRDLLRAARRRQQPRNGIDLAAVPLEELHAHSH
PLLASWGRQGRDYIRMLDEFDEASAAAGDGDHLRVDLFSDDEGDTLLRQLQGAVRDLLPL
AEHRFPTPDAADRSIVFHIAHSVQREVEVLHDQLLAMFATDGTLRPRDVVVMVPDIDVFT
AAIHAVFGQYRRGDARHIPFEIGDVNDRSVNPLLVALEWLLRLPQQRCRQSEVRDLLDVP
AVAQRFGLAPGDLPILGQWIEGSGVRWGLDRRHREGLGLGPAGEQNAWIFGIRRMLLGYA
SGTGAAFGDIEPYGEVGGLDAALAGSLAQLVESLLAWRAALAQARTPGEWGAQARALLAA
FFDAREESDRLTLNQLNDTLNAWLETCEGAGFDEEVPLSVLREAWLGALGEPSLEHQFVS
GGVTFCTLMPMRAVPFRAVCLLGMNDGDFPRRASRLDFDLLALPGMSRPGDRSRRDDDRY
LMLEAVLAARDTLYVSWCGRNVRDNSEQPPSVLVAQLMDYLRAGWHLPDLSERTTEHALQ
PFSRRYFEQGGLLTYAGEWRAAHGGATVPERIELPPFEIDERFRLKLSMLAAFLRQPVRY
FFRQRLGVIFGESALVGEDEEPFTLDGLQRYGLEDALLQDAGDEDDDESKALASLTVRAQ
RLQREGVLPIGLIGDRVRDTLVASLLPVRQAWLRLRTRYPHPAHKLPVGLTPEGIVLEDW
IDGLRSDGSATVWLMQMSSKALDKAGQPRGDKLIGMWLRQLAASAQGATLTGLLVARDAV
VTMPPLAQPDALAVLGRVVALWRANMDGPLPTACKTALALVTGGDARSTYDGGFEVNGEV
ADESLARLWPDYAALAAETEHARVAQALYGPLADWLKSHVSVQPIEGEGA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcccatctcccccggcttgttgatcctgcacggcaaccagctcgaacagctg
cgcgccgccgtgttcgggtggctgcgcgggcatccgctcgatccgctggagacggacatc
ctgctggtgcagtcgaacggcgtggccgaatggctcaagatcgcgctggccgaggagatg
ggcgtgtgtgccgccacgcgcgtggcgctgccggcgcgcttcctgtggcaggcctaccgc
gcgatgctggggcgcgagcgcgtgccgcgcgtctccgcattcgacaagggaccgctgacg
tggcgcctgatgctcctgctgcctgcgctgctggccgacgagacgttcgcaccgctgcgg
catttcctggccgacggcgatccggaccggcgcctgcaactggccgagcggctgtccgac
ctgttcgaccagtaccaggtataccgcgccgactggctggccgactgggccgccgggcgt
gacctgatgcgctgcccgcgcggcatcgagtatccgctgccggagggccagcgctggcag
gcggcgctgtggcgcgccatcgtggccagcgtgccggaagaggagcgggcgctgggccgt
gccagcgtgcacacggcgttcgtgcgggcggtggaaagcggcgcgcagccggtggcagcg
ctgccgcgccgtgtggtgctgttcggcgtctccgcgctgccgtaccagaccttgcaggcg
ctggcatcgctggcgcgcttcacgcaggtgattgtcgccgtgcccaatccgtgccgctac
tactggggcgatatcatcgacgggcgcgacctgctgcgcgccgcgcgccgccgccagcag
ccgcgcaacggcatcgacctggcggccgtgccgctggaggagctgcatgcgcacagccat
ccgctgctggccagctggggcaggcaggggcgcgactacatccgcatgctggacgaattc
gacgaggcgtcggccgcggccggcgacggcgatcacctgcgcgtggacctgttcagcgac
gacgagggcgacaccttgctgcgccagttgcagggcgccgtgcgcgacctgctgccgctg
gccgagcatcgtttcccgacgcccgatgcggcggaccgctcgatcgtcttccacatcgcc
cacagcgtgcagcgcgaggtggaggtgctgcacgaccagctgctggcgatgttcgcaacg
gacgggacgctgcgcccgcgcgacgtggtcgtgatggtgcccgatatcgacgtcttcacg
gccgccatccacgccgtcttcggccagtaccggcgcggcgacgcgcgccatatcccgttc
gagatcggcgacgtcaacgaccgcagcgtcaatccgctgctggtggcgctggaatggctg
ctgcgcctgccgcagcagcgttgccgccagagcgaggtgcgcgacctgctggacgtgccg
gccgtggcgcagcgcttcggcctggcaccaggcgacctgccgatcctgggccagtggatc
gagggatcgggcgtgcgctggggcctggaccggcgccaccgcgaaggcctcggcctgggc
ccggccggcgagcagaacgcatggatcttcggcatccgccgcatgctgctcggttacgcc
agcggcacgggcgcggcgttcggcgacatcgagccgtatggcgaagtgggcgggctcgat
gcggcgctggccggttcgctggcgcagctggtggaaagcctgctggcctggcgcgccgcg
ctggcgcaggcgcgcacgccaggcgaatggggcgcccaggcgcgcgcgctgctggcggca
ttcttcgatgcgcgcgaggaatccgaccgcctgaccctgaatcagctgaacgacacgctc
aacgcgtggctggagacgtgcgaaggcgccggcttcgacgaggaggtgcccctgtccgtg
ctgcgcgaagcgtggctgggcgccctgggcgagccgtcgctggagcaccagttcgtctcc
ggcggcgtcacgttctgcaccctgatgccgatgcgcgccgtgccgttccgcgcggtctgc
ctgctgggcatgaacgacggcgacttcccgcgccgcgccagccggctcgatttcgacctg
ctggcgctgcccggcatgagccgcccgggcgaccgctcgcgccgcgacgacgaccgctac
ctgatgctcgaggcggtgctggccgcccgcgacacgctgtacgtcagctggtgcggccgc
aacgtgcgcgacaacagcgagcagccgccctcggtactggtggcgcagctgatggactac
ctgcgcgcgggctggcacctgccggacctgagcgagcgcaccaccgagcacgcgctgcag
ccgttctcgcggcgctatttcgaacagggcgggctgctgacgtatgccggcgaatggcgc
gcggcgcacggcggggcgacggtgccggagcggatcgaactgccgccgttcgagatcgac
gagcgcttccgcctgaagctgtcgatgctcgctgcgttcctgcgccagccggtcagatat
ttcttccgccagcgtctcggcgtcatattcggcgaatcggccctggtaggcgaggacgaa
gagccgttcacgctcgatggcctgcagcgctacggcctggaggacgcgctgctgcaggac
gcgggcgacgaggatgacgacgaatcgaaagcgctggccagcctgacggtgcgcgcgcag
cgcctgcagcgcgaaggcgtgctgcccatcggcctgatcggcgaccgcgtgcgcgacacg
ctggtggcatcactgctgcccgtgcgccaggcctggctgcgcctgcgcacgcgctatccg
cacccggcccacaaattgccggtcggcctgacgcccgaaggcatcgtgctggaggactgg
atcgacgggctgcgcagcgacggcagcgccaccgtctggctgatgcagatgtcgtcgaaa
gcgctcgacaaggcgggccagccgcgcggcgacaaactgatcggcatgtggctgcgccag
ctggccgccagcgcgcagggcgccacgctcacgggcctgctggtggcgcgcgatgcggtg
gtgacgatgccgccgctggcgcagccggacgcgctcgccgtgctggggcgcgtcgtggcg
ctgtggcgcgccaatatggacggaccgctgccaacggcctgcaagacggcgctggcactg
gtgaccgggggcgatgcgcgcagtacctatgacggcggcttcgaggtgaacggggaagtg
gccgatgaatcgctggcgcggctgtggcccgactacgcggcgctggcggccgaaaccgaa
catgcgcgcgtggcgcaggcgctgtatggcccgctggcggactggctgaagagccacgtg
tcggtgcagcccatcgaaggagagggcgcatga
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