Pseudoduganella plicata: E1742_05980
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Entry
E1742_05980 CDS
T06563
Name
(GenBank) NADH-quinone oxidoreductase subunit F
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00630
Glyoxylate and dicarboxylate metabolism
mpli00680
Methane metabolism
mpli01100
Metabolic pathways
mpli01120
Microbial metabolism in diverse environments
mpli01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E1742_05980
09102 Energy metabolism
00680 Methane metabolism
E1742_05980
Enzymes [BR:
mpli01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
E1742_05980
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Motif
Pfam:
Complex1_51K
2Fe-2S_thioredx
NADH_4Fe-4S
SLBB
Motif
Other DBs
NCBI-ProteinID:
QBQ35759
UniProt:
A0ABX5S608
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Position
complement(1379301..1381055)
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AA seq
584 aa
AA seq
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MLTAAYTNVNNERPGSCEPPDHPHCPAAAAVPSSRERKRQAPRGRRVDPVALDEVTALLG
SAPRRRDLLIEFLHLLQDRYGCLATNHLAALAQELRMAQAEVYEVASFYHHFDIVREGEA
APAGLTVRVCAGLSCEMAGARALLDRLPALLGLEVRVLAAPCIGRCEQAPAALVGKAAVP
AATLESIAATVDRGTSPAPAHIGYDEYVANGGYALLRACAAGERSGESLIEALEHAGLRG
LGGAGFPTGRKWRIVKAEGGPRLMAVNVDEGEPGTFKDRVYLERDPHRFIEGMLLAARVV
GIDDIYIYVRDEYHDARALLAGELARLQGEAPIAGLPRIHLRRGAGAYICGEESAMIESI
EGKRGMPRLRPPYVAQVGLFGRPTLEHNFETLYWVRDIVERGPDWFAGQGRNGRKGLRSF
SVSGRVRSPGVKLAPAGISVRELIDEYCDGMADGHTLYAYLPGGASGGILPAALGHLPLD
FDTLQPYGCFIGSAAVIVLSQQDSAAAAARNMMAFFRDESCGQCTPCRVGTAKAVGLIAA
PRWDTALLGELSQVMRDASICGLGQAAPNPVDCVMRYFPHEVTA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggcagcatatacgaacgtcaacaacgagagacctggcagctgtgagccaccc
gatcatccccattgccccgctgccgcagctgtcccgtcgagccgcgaacgcaaacgccag
gcgccacgcgggcggcgcgtcgaccctgtcgcgctggacgaagtcacggcactgctgggc
agtgcgccgcgccgccgcgacctgctgatcgaattcctgcacctgctgcaggaccgctac
ggctgcctggcaacaaaccacctggccgcgctggcgcaggagctgcgcatggcgcaggcg
gaagtgtatgaagtggcatcgttctatcaccatttcgatatcgtgcgcgagggcgaggcg
gcaccggccgggctgacggtgcgggtgtgtgccggcctgtcctgcgagatggccggggcg
cgcgcgctgctggaccggctgcctgcgctgctgggccttgaggtgcgcgtgctggccgca
ccctgcatcggccgctgcgaacaggcgccggcggccctggtgggcaaggccgcggtgcct
gccgccactctcgagagcattgccgcaacggtcgatcgcggcacgtcgcccgcacccgcc
catatcggctacgacgagtacgtcgccaatggcggctacgcgctgctgcgcgcctgcgcg
gcgggcgagcgcagcggcgagtcgctgatcgaggcgctggagcacgcgggcctgcgcggc
ctgggcggggccgggtttccgaccgggcgcaaatggcgcatcgtcaaggccgaaggcggc
ccccgcctgatggccgtcaacgtggacgagggcgagccgggcacgttcaaggaccgcgtc
tacctggaacgcgatccgcaccgcttcatcgagggcatgctgctggctgcccgggtcgtc
ggcatcgacgatatctatatctacgtgcgcgacgaataccatgacgcacgcgcgctgctg
gcgggcgagctggcgcggctgcagggcgaagcaccgatcgccggcctgccgcgcattcac
ctgcggcgcggcgccggtgcctatatctgtggcgaggaatcggcgatgatcgagtccatc
gaaggcaagcggggcatgccgcgcctgcgtccgccgtacgtcgcgcaggtcgggctgttc
ggcaggccgacgctggaacacaacttcgaaacgctgtactgggtgcgcgacatcgtcgag
cgcgggccggactggttcgcgggacaagggcgcaacggccgcaagggcctgcgttcgttt
tccgtgtcgggtcgcgtcaggtcgcccggcgtcaagctggcgccggccggcatctccgtg
cgcgaactgatcgacgaatactgcgacggcatggcggacggccacacgctgtacgcctac
ctgcccggtggcgcctccggcggcatcctgccggccgcgctgggacacctgccgctcgac
ttcgacacgctgcagccctacggctgcttcatcggttcggccgccgtcatcgtgctgtcg
caacaggacagcgccgccgcggccgcccggaacatgatggcctttttccgcgacgagtcg
tgcggccagtgcacgccctgccgcgtcggcacggccaaggcggtggggctgatcgccgcg
ccgcgctgggatacggcgctgctgggcgaactgtcccaggtgatgcgcgacgcgtccatc
tgcggcctgggccaggcggcgcccaatcccgtcgattgcgtgatgcgctattttccgcac
gaggtgacggcatga
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