Pseudoduganella plicata: E1742_06060
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Entry
E1742_06060 CDS
T06563
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00061
Fatty acid biosynthesis
mpli00071
Fatty acid degradation
mpli01100
Metabolic pathways
mpli01212
Fatty acid metabolism
mpli02024
Quorum sensing
mpli04146
Peroxisome
Module
mpli_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E1742_06060
00071 Fatty acid degradation
E1742_06060
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E1742_06060
09145 Cellular community - prokaryotes
02024 Quorum sensing
E1742_06060
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mpli01004
]
E1742_06060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpli04147
]
E1742_06060
Enzymes [BR:
mpli01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E1742_06060
Lipid biosynthesis proteins [BR:
mpli01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E1742_06060
Exosome [BR:
mpli04147
]
Exosomal proteins
Exosomal proteins of breast milk
E1742_06060
Exosomal proteins of breast cancer cells
E1742_06060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
MerE
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QBQ35770
LinkDB
All DBs
Position
1395469..1397019
Genome browser
AA seq
516 aa
AA seq
DB search
MADVDLAALPSRLAYAIAAQARRAPASPALREPDRGDIGYGDLWHAIESVAGQLRALGVR
PGDRVMAVGENCANLVALIFATGLCDAWIVNVNARLSAREIASIREHSGARRVFYTADIS
PDARAHGERDGAVPAQAPFGQWLVGAVNDDCAPEPVHADGALQPAALIYTTGTTGQPKGV
LLSHRTLLYVATVSGRLRGLVPTDRAYGVLPIAHVYGLASVMLGTLNAGACLVLAPRFSA
PALLRALREERLTILQGVPAMYARVLEQLGPDASPLPNSLRFAYAGGSPLTPGLKAAVER
LLGVALHNGYGMTESGPTICQTDLAAPRNDTSVGHPIPGVAVRVVDAAGADVPVGEPGEI
RVRGPNVMLGYYRDPALTAATMHPGGWLNTGDMGRLGPDGALFIVGRTKELIIRSGFNVY
PLEVETVLNAHPAVTQSAVVGRTCGDGNEEVIAFVEAAPRHAADPAALVAELTTYLGGAL
APYKCPAHIVVLPALPAAATGKILKGRLRDLAMQPL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgtcgatctcgccgccctgccatcacggctggcatacgccatcgcggcgcaa
gcccggcgcgcgcccgcttcaccggcgctgcgcgaaccggatcgcggcgacatcggctac
ggcgacctgtggcacgccatcgaaagcgtcgccggccaactgcgcgcgctgggcgtgcgc
cccggcgaccgcgtcatggccgtcggcgagaactgcgccaacctggttgcgctgatcttc
gcgactggcctgtgcgatgcgtggatcgtcaacgtcaacgcccggctgtcggcgcgcgag
atcgcgtcgatccgtgaacacagcggcgcgcgccgggtgttctataccgccgatatttcg
ccggacgcacgcgctcacggcgaacgcgatggcgccgtgccggcccaggcgccgttcggc
caatggctggtcggcgccgtcaacgacgactgtgcgccggaacccgtgcatgccgacggc
gccctgcaaccggcagcactgatctacacgacgggcacgacgggccagccgaaaggcgtg
ctgctgtcgcatcgcacgctgctgtacgtcgccaccgtttcaggccgcctgcgcggcctt
gtgccaacggaccgcgcctatggcgtgctgccgatcgcgcacgtgtacggcctggcttcg
gtcatgctgggcaccctcaacgccggcgcctgtctcgtgctggcgccgcgcttctcggca
cccgccctgctgcgcgcgctgcgcgaggaacgcctgacgatcctgcagggcgtcccggcg
atgtatgcgcgcgtgctggagcagctgggaccggatgcatcgccactgccgaacagcctg
cgcttcgcctacgcgggcggctcgccgctgacgccgggcctgaaggcggccgtcgaacgg
ctgctgggcgtggcgctgcacaacggctacggcatgacggaaagcggaccgacgatctgc
cagacggatctggcggcgccgcgcaacgacacgtcggtgggccatccgattcccggggtg
gccgtgcgcgtcgtcgatgcggccggcgccgacgtaccggtgggcgagccgggcgaaatc
cgggtgcgcggaccgaacgtcatgctgggctactaccgcgatcccgcgttgacggcggcc
acgatgcatcccgggggctggctcaataccggcgacatgggccggctgggacccgacggc
gcgctgttcatcgtcggccgcaccaaggagctgatcatccgctccggcttcaatgtctat
ccgctggaagtggagacggtgctcaacgcgcacccggccgtcacgcagtcggccgtggtg
ggccgcacctgcggcgacggcaacgaggaagtgatcgcgtttgtcgaagcggcgccgcga
cacgctgccgaccccgcggcgctggtggccgagctgacgacgtatctgggcggcgcgctc
gcgccgtataaatgccccgcgcatatcgtcgtgctgcccgcgctgcccgccgcggcgacg
ggcaagatcctgaaaggccggctgcgcgacctggccatgcagccactataa
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