Pseudoduganella plicata: E1742_06775
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Entry
E1742_06775 CDS
T06563
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_06775 (sbcD)
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E1742_06775 (sbcD)
Archaeal homologous recombinant proteins
E1742_06775 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QBQ35890
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Position
1566697..1567929
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AA seq
410 aa
AA seq
DB search
MRLLHTSDWHLGQSLHNFDRHYEHQCFLDWLLETIVAEQADALLIAGDVFDNANPSAVSQ
RQLYRFLQQARERVPGLDIVVTAGNHDSPGRIEAPGPLLEAHGTRVIGHVLRDDNGNIDV
GRMVLPLTNRAGHVAAWCLAVPFLRPADVPRGGQDETVDGYLAGIAALYAQAQEHALSLR
QPGQAVVAMGHCHMVDGQMSADSERRIVIGGTEMLPAGMFGPEVAYAALGHLHLAQQIGR
HAHIRYCGSPIPLSFSEVHYQHQVLRIDLDGGALQETVAIPIPRAVHLLRVPSRPAPLAQ
VLDELEALDFPAAPPYAQPFLEVRVLLDAPEPGLRSRIEAALEGKHVRLAKIDTASSARG
PSLVDAAVSLDQLAQLQPDEVFARLYRQKYGNDAPDDQVAAFAELLLAGV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacctccgactggcacctcggccagtcgttacacaatttcgaccgc
cattacgagcaccagtgcttcctggactggctgctggagaccatcgtggccgaacaggcc
gacgcgctgctgatcgccggcgacgtgttcgacaacgccaacccgtcggccgtatcgcaa
cgccagctgtaccgcttcctgcagcaggcgcgcgagcgcgtgccggggctggacatcgtc
gtcacggccggcaatcacgattcgccggggcggatcgaggcgccgggaccactgctggag
gcgcacggcacgcgcgtgatcggccacgtgctgcgcgacgacaacggcaatatcgacgtg
ggccggatggtgctccccctgacgaaccgcgccggccacgtggctgcctggtgcctggcc
gtgccgttcctgcgcccggccgacgtgccgcgcggcgggcaggatgaaacggtggacggc
tacctggccggtatcgccgcgctgtacgcccaggcgcaggaacacgccctgagcctgcgc
cagccgggccaggccgtcgtggcgatgggccactgccatatggtggatggccagatgtcg
gccgactcggagcgccgcatcgtcatcggcggcacggaaatgctgccggccgggatgttc
gggccggaagtcgcctacgctgcgctgggccacctgcacctggcgcagcagatcggccgc
cacgcgcacatccgctattgcggcagcccgatcccgctgtcgttctccgaggtgcactac
cagcaccaggtgttgcgcatcgacctcgatggcggcgccctgcaggaaaccgtcgccata
ccgattccgcgcgcggtgcacctgctgcgcgtgccgtcgcgccccgccccgctggcgcag
gtcctggacgagctggaggcgctggacttccccgccgcgccgccgtacgcgcagccgttc
ctggaagtgcgcgtgctgctggacgcgcccgagccgggcctgcgctcgcgcatcgaggcg
gcgctggagggcaagcatgtgcgtctggcgaagatcgacacggccagcagcgcgcgcggg
ccgtcgctggtggatgccgccgtctcgctggaccagctggcgcagttgcagcccgatgaa
gtgttcgcgcgcctgtaccggcaaaaatacggcaatgacgccccggacgaccaggtggcc
gcgtttgccgaactgctgctggcgggtgtctga
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