Pseudoduganella plicata: E1742_07770
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Entry
E1742_07770 CDS
T06563
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1742_07770 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpli03019
]
E1742_07770 (pnp)
03016 Transfer RNA biogenesis [BR:
mpli03016
]
E1742_07770 (pnp)
Enzymes [BR:
mpli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E1742_07770 (pnp)
Messenger RNA biogenesis [BR:
mpli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E1742_07770 (pnp)
Transfer RNA biogenesis [BR:
mpli03016
]
Prokaryotic type
tRNA degradation factors
E1742_07770 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_RRP5
KH_KhpA-B
OB_RRP5_4th
LodA_N
DUF5813
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QBQ36060
UniProt:
A0A4P7BCZ6
LinkDB
All DBs
Position
complement(1774064..1776178)
Genome browser
AA seq
704 aa
AA seq
DB search
MFNKVTKTFQYGQHTVTLETGEIARQASGAVLVSMDDTVVLATVVARKDAKPGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYMNEVQVIIHVLSV
NPEIDPDIASMIGASAALCVAGVPFNGPIGAARVGYANGQYILNPTTTQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEVMLGGVVYGHEQMRAVIDAIHALVEEGGKPEIEWTPPAKNE
ALIAKVAQFAEAKINEAYQTKNKQARQQALRSMQSEVIADLAAQAAAEGTEAPDSVEVGN
ILFDMEAKVVRSQILNGEPRIDGRDTRTVRPIAIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEYTDDFMLHYNMPPFATGETGRVGTPKRREVGHGRLAKRALVAAL
PSPEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALAQAKEGRQHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYDGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQQVRVKVLETDDRGRLKLSMKAADEAAPAA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaagttacgaaaaccttccagtacggccaacacaccgtgaccctggaaacc
ggcgagatcgctcgccaggcatccggcgcggtactggtgtcgatggacgacaccgtcgta
ctggcaactgtcgtggcacgcaaggacgccaagccaggccaggatttcttcccgctgacc
gtcgactatatcgagaagacgtacgcagccggcaagatccctggcggcttcttcaagcgc
gaaggccgtccttccgagaaggaaacgctgacttcccgcctgatcgaccgtccgatccgc
ccgctgttcccggaaggttacatgaacgaggtgcaggtcatcattcacgttctgtcggtc
aatcctgaaatcgatccggacatcgcttccatgatcggtgcctccgccgccctgtgcgtg
gccggtgtgccgttcaacggcccgatcggcgccgcccgcgtgggttacgccaacggccag
tacatcctgaacccgaccaccacgcagctgaagacgtccgagatggacctcgtcgtagcc
ggtaccgaaacggccgtgctgatggtcgaatcggaagccaagcagctgtccgaggaagtc
atgctgggcggtgtcgtctacggccacgagcagatgcgcgccgtgatcgacgccatccac
gcgctggtcgaagaaggcggcaagcctgaaatcgaatggaccccgccggccaagaacgaa
gcgctgatcgccaaggtcgcgcagttcgccgaagcgaagatcaacgaagcgtaccagacc
aagaacaagcaggcacgccagcaggcgctgcgttcgatgcagtccgaagtgatcgccgac
ctggccgcgcaggccgccgccgaaggcaccgaggctccggactccgtcgaagtgggcaat
atcctgttcgacatggaagccaaggttgtccgttcgcagatcctgaacggcgagccgcgt
atcgacggccgcgacacgcgcaccgtgcgtccgatcgcgatccgcacttccgtgctgccg
cgtacccacggttcggcgctgttcacccgcggcgagacgcaggcgctggtcgtcgcgacg
ctgggcaccgcccgcgattcgcagaagatcgacgcgctgatgggcgagtacaccgacgac
ttcatgctgcactacaacatgcctccgttcgccaccggcgaaacgggccgtgtcggcacg
ccaaagcgccgcgaagtgggccacggccgtctggccaagcgcgcgctggtcgccgcactg
ccatcgccggaagagttcagctactcggtgcgcctggtgtccgagatcaccgagtcgaac
ggttcgtcgtcgatggcttccgtctgcggcggctgcctggcattgatggacgcgggcgtg
ccgatgaaggcgcacgtcgccggcatcgccatgggcctgatcaaggaaggcggcaagttc
gccgtgctgtccgacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtc
gccggcaccgccaacggcatcacggcgctgcagatggacatcaagatccagggcatcacg
aaagagatcatgcaggtcgcactggcccaggcaaaagaaggccgccagcacatcctgggc
gaaatgcagaaggcgatgccgcacgtgaagacggagctgtccgacttcgcaccgcgcctg
atcacgatcaagatcaatccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtc
atccgcgcgctgaccgaggaaacgggcacgcagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgtcgatgccgccgccggccaggaagccaagcgccgcatcgaggagctg
acggcatcggtcgaagtgggcaagacctacgacggcaccgtgctgaaactgctcgacttc
ggcgccatcgtccaggtcatgccgggcaaggacggcctgctgcacatctcgcagatcgcc
aacgagcgcgtcaacgccgttgccgactacctgaaagaaggccagcaagtgcgcgtcaag
gtcctggaaacggacgaccgcggccgcctgaagctgtcgatgaaggcagcggacgaagcc
gcaccggcagcgtaa
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