Pseudoduganella plicata: E1742_08420
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Entry
E1742_08420 CDS
T06563
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00020
Citrate cycle (TCA cycle)
mpli00190
Oxidative phosphorylation
mpli00650
Butanoate metabolism
mpli00720
Other carbon fixation pathways
mpli01100
Metabolic pathways
mpli01110
Biosynthesis of secondary metabolites
mpli01120
Microbial metabolism in diverse environments
mpli01200
Carbon metabolism
Module
mpli_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mpli_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mpli_M00149
Succinate dehydrogenase, prokaryotes
mpli_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E1742_08420 (sdhC)
00650 Butanoate metabolism
E1742_08420 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
E1742_08420 (sdhC)
00720 Other carbon fixation pathways
E1742_08420 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Fumarate_red_D
Motif
Other DBs
NCBI-ProteinID:
QBQ36179
LinkDB
All DBs
Position
complement(1917459..1917881)
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AA seq
140 aa
AA seq
DB search
MSEAVREAPRKQRREIRNIHVTELMNYRQPFSAIVSIMHRVSGFLMFALLPFILYLLQES
IRSEISFAHFQGIASHPFAKLVILALVWGYMHHFCAGVRHLVMDTHVGLDKDSARKSAIA
VLVITWVVVILVALKLFGVF
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccgtaagggaagcaccgcgcaagcaacggcgagaaatccgtaacattcac
gttactgagctgatgaattatcgtcagccgttctccgccattgtgtccatcatgcaccgc
gtgagcggcttcctgatgtttgccctgctgccgttcatcctgtatctgctgcaggaaagc
atccgttccgagatctcctttgcccacttccagggcatcgcctcccatccgttcgccaag
ctcgtcatcctggcactggtctggggctacatgcaccacttctgcgccggcgtccgccac
ctggtcatggacacgcacgtcggcctggacaaggattcggcccgcaagagcgccatcgcc
gtactcgtcatcacgtgggttgtcgtcattctcgtcgccctgaaactgttcggagtgttc
taa
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