Pseudoduganella plicata: E1742_08490
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Entry
E1742_08490 CDS
T06563
Name
(GenBank) DUF4214 domain-containing protein
KO
K20276
large repetitive protein
Organism
mpli
Pseudoduganella plicata
Pathway
mpli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E1742_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
Big_13
DUF4214
HemolysinCabind
Big_9
Cadherin_5
Expansin_C
Big_3_3
Cadherin_3
Motif
Other DBs
NCBI-ProteinID:
QBQ36189
UniProt:
A0A4P7BFL3
LinkDB
All DBs
Position
complement(1932578..1937668)
Genome browser
AA seq
1696 aa
AA seq
DB search
MSSTFDFSANVVADEDPNAGPFQRIASQTVDGHTLTFTGNAGEWIVMDDVMYTDHDYARL
HGKALFNTFDEIATSLRLSLDNGKLFDLTSLNIADIPGTTGAQFRFTTNKGSVVSGPLDG
EFSLTLIGSDPALKGVAYVDIQMVNSNDPFIPGIDDVVLSNITAANVAPSFVGATTSLNA
AQNGGAVNLAGLLHVSDVDTGQTLTWTQNSGPAHGTLTLNSATAATGATDITPGGTLTYV
PTAGYAGTDSFSVQVSDGSATAIRTITVNVTPGQPGAPGLATASDTGLSTTDNVTAANAM
TFSGTSAAGDTTSTVRVFVDVNGNGVYNAGEATGTATVGNGSWTVAGINTAALTTGTYNV
YSVVTSATGSLTSAASSPLAVTVDRTAPTVTFSGIDISNDTGASDSDFATSAAAQTITAT
LSGALAAGDVVYGSVDNGSSWADITGKVSGTTLAWTGATLVPGGGIRLRVDDQHGNEGTT
ATQGYTLDTTAPTLTSASLALAADTGASAGDFITNVAAQTLSGTLSANTAAGDTVEVSLN
DGGTWTAAANTAGTKTWSLAGQTLTGSDTLQVRVTDAAGNHGSAASQAYVLDTAAPTATI
KADDQIAPSGSTFTFAVTYADTGGATLDASTFGTSNVGVFDPNGNKLGVTGFAVNGNEVT
YTAQAPGGSWDTGDVGTYKIAINAGSVLDLAGNAVAANASAGTFNVAYSTAPAVSALKLS
SDTGISNTDFITNVAGQTVTATLSKALTADDMVFGSLDNGGKWVDITSQVSGTTVQWSGI
TLAGTDTIVIKVTDKNAQDGIAASHAYQLDTGTPTLAIDDAALSADNGTSGTDFITNDAT
QNMGGTLSGPLAAGEFVEVSLDNGTSWTTATGSIGSRVWSLQNKTLSGSGTLQVRVSDTA
GNHGNALTQAYVIDTAAPTAATPVRADLIDPATATFTFTVTYGDTGGAGLDKVSIGTGNV
SVTGPAGALTVSAAQANGNTVTYTVAAPGGSWDASEAGDYTIGLSGVVDVAGNALVANPA
AHSFHVGFRPAATITVGDTTLTAGETTVVTIAFTQAVQDLDLADLTAPNGTLTQLATADG
GLTWTATLTPAANAWAASNTVVLNMAQVHSADGTAGIGTATSNSYAVQTGTEPQPPQPQP
PQPQPTGTVDGVPITSTQQTDPGTGIVNTTVTVPVVTSTRTDDPNTPNKGLADIPLAATK
GGVGAALTVSLPVGTGLDASGPATLLSNQEALLDLIRRIEQKTTTGSDVQQQMTGQGTSF
LDNLLASTLLQTATVTPTAPATAAGTILITGAAPTGATVHGIVLDARQVGPNVTLQLDNV
QFAAVVGAATLRGGAGNNIVIGDDASQSVFLGPEDDQLSGGGGDDVIGSAGGNDLLSGDA
GNDAAAGGIGNDSVSGGTGNDVLQGGRSDRGHWDFTLAADGTLSAGHQTLMFAPAQSETL
ARAELDAGADALLFLAAEAVSLRDIALLYHGAFGRAADLPGLNFYVEQGASLTQVAQSFL
RSPEWAASPLNVTTDSAYAQALYRQVLGREGEATGAAHWLAKLAGTDGPALSRADVLVAF
ATSPEHRAHYADGIVVAAADVTAEQGWITGSGDDRLDGGAGNDVVVGGDGIDTAVFAGKQ
SDWGLLVTGGEAVVLTNASAGEADTVSGIERSEFADGTLDLSFTQGGRSKRWACCTRPCW
IAPPTCLAWHGGPASI
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcacatttgatttcagcgcgaacgtagtcgccgacgaagatcccaacgccggt
ccattccagcgaatcgccagccagaccgtcgacggccatacgctgacatttaccggcaac
gccggcgagtggattgtgatggacgatgtgatgtacaccgaccacgattacgcgcgcctg
catggcaaagcgctgttcaacactttcgacgaaattgccacgtccctgcgcctgtcgctc
gacaatgggaagctgttcgatctgacgtcgctcaatattgccgatatccccggaacgact
ggtgcgcaattccgtttcacgaccaacaaagggtcggtggtgagtggcccgctggacggg
gaattctcgctgacgctgatcggttcggaccccgcgctcaagggcgtcgcctacgtcgat
atccagatggtgaattcgaacgacccgttcatccccggcatagacgatgtcgtcctcagc
aatatcacggcggccaacgtcgcaccatcgttcgtcggcgcgacaacgtcgctcaacgcg
gcgcagaacggcggcgcagtcaaccttgccggcctgctgcacgtcagcgacgtcgatacc
ggccagacgctgacgtggacccagaatagcggtcccgcgcacggcacgctgaccctgaac
agcgccacggccgcaaccggggcgaccgacatcacgcccggcggcacgctgacctatgtg
ccgacggcaggttatgccggcaccgacagcttcagcgtgcaggtatccgacggcagcgcc
accgcgatccgcacgatcaccgtcaacgtcacgcctggccagccaggtgcgccgggcctg
gccaccgccagcgataccgggctgagcacgaccgacaacgtgacggccgcgaatgcgatg
acgttttccggcaccagcgcggcgggcgacaccaccagcaccgtgcgcgtgttcgtcgat
gtcaacggcaatggcgtctataacgccggggaagccacaggtaccgccaccgtcggcaat
ggcagctggaccgtggccggcatcaatacggccgcactcaccacgggtacctacaacgtc
tactcggtcgtgacgtcggccaccggcagcctgaccagcgcagccagcagcccgctggcg
gttaccgtggaccgcacggcgccgacggtcacgttctccggcatcgatatttccaacgac
acgggcgcgagcgattcggacttcgccacgtccgccgccgcgcagaccatcacggccacg
ctctccggcgcgctggcggccggcgacgtcgtctacggttcggtcgacaacggcagcagc
tgggccgacatcaccggcaaggtcagcggcacgacgctggcctggacgggcgcgacgctc
gttcccggcggcggcatccgcctgcgcgtggacgaccagcacggcaacgagggcacgacc
gccacgcagggatatacgctcgataccaccgcgcccaccctgacgtcggcgtcgctggcg
ctggcggccgataccggcgccagcgccggtgatttcatcaccaatgtcgccgcgcagacc
ctttccggcacgctgtcggccaacacggcggcgggcgacaccgtcgaggtatcgctgaac
gacggcggcacgtggaccgcggctgccaatacggcgggcacgaaaacctggtcgctggcc
gggcagacgctgaccggcagcgacacgctgcaggtgcgcgtgaccgatgcagccggcaac
cacggcagcgccgcgtcgcaggcgtacgtgctcgatacggcagcgccaacggcaaccatc
aaggcagatgaccagatcgcgccgtcgggcagtacatttaccttcgcggtaacgtatgcc
gacacgggcggcgcgacgctcgatgcgagcacgttcggcacgagcaatgtcggcgtcttc
gacccgaacggaaacaagctgggtgtcaccggtttcgccgtcaacggtaacgaggtgact
tatacggcgcaggcaccgggcggcagctgggatacaggcgacgtgggcacgtacaagatc
gccatcaacgctggctccgtgctggatctggccggcaacgccgtcgctgcgaatgcgtcg
gccgggaccttcaacgttgcctacagcaccgcgccggccgtgtccgcgctgaagctgtcc
agcgacaccggcatcagcaataccgatttcatcacgaacgtggcggggcagacggtcacg
gcaacgctcagcaaggcgctgacggcggacgacatggtattcggctcgctggacaacggc
ggcaagtgggtggacatcacgagccaggtcagcggcaccaccgtgcagtggagtggcatc
acgctggccggcaccgacacgatcgtcatcaaggtcaccgacaagaacgcgcaggacggt
atcgcggccagccacgcttaccagctcgacacgggtacgccgacgctcgccatcgacgat
gcggcgctgtcggccgacaacggcaccagcggcaccgacttcatcacgaacgacgcgacg
cagaacatgggcggcacgctgagcggcccgctggccgccggcgaattcgtcgaagtctcg
ctcgacaatggcaccagctggacgacggccaccgggtcgatcggatcccgcgtgtggtcg
ctgcagaacaagacgctgtccggcagcggcacgctgcaggtgcgcgtcagcgacacggcg
ggcaatcacggcaacgcgctgacgcaggcctatgtaatcgacacggcggcgccgacggcg
gccacgcccgtgcgcgcggacctgatcgatccggccacggccaccttcacgttcaccgtg
acctacggcgacacgggcggcgcggggctggacaaggtatcgatcggcacgggcaacgtg
tccgtcaccggcccggcaggcgcgctgaccgtcagcgctgcgcaggccaacggcaatacc
gtcacctacacggtggcggcgccgggtggcagctgggacgccagcgaggcgggcgattac
acgatcggcctgtccggcgtggtggacgttgcaggcaatgcgctggtggcaaaccccgcg
gcgcacagcttccacgtcggcttccggccggcggcgacgatcaccgtcggagacacgaca
ttgaccgcaggcgagacgaccgtggtgacgatcgcgttcacccaggcggtgcaggatctc
gacctggccgacctaaccgcgccgaacggcaccttgacccaactggcaacggcggacggc
ggcctgacgtggacggcgacgctgaccccggcagccaacgcatgggccgcgtcgaacacg
gtcgtgctgaacatggcgcaggtgcatagcgcggacggcacggcgggaatcggcacggcc
acgtcgaacagctatgccgtgcagacgggaaccgagccgcagccgccgcagcctcagccg
ccccagccgcagcctaccggcacggtcgacggcgtgcccatcaccagcacgcagcagacc
gacccgggcaccggcatcgtcaacaccaccgtcaccgtgccggtcgtgacgtcgacgcgc
accgacgatccgaacacgccgaacaagggcctggccgacattccgctggccgccacgaag
ggtggcgtgggcgcggcgctcaccgtcagcctgccggtgggcacggggctggacgccagc
gggccggccacgctgctgtcgaaccaggaggcgctgctggacctgatccgccgcatcgag
cagaagaccacgaccggctcggacgtgcagcagcagatgacgggccagggcacgagcttc
ctcgacaacctgctggccagtactctgctgcagacggccacggtgacgccgaccgcgccc
gccacggcggcgggcacaatcctgatcaccggcgccgccccgacgggcgccaccgtgcac
ggcatcgtgctcgatgcgcggcaggtgggcccgaacgtcacgctgcagctcgacaacgtg
caatttgccgccgtcgtcggcgcggccacgctgcgcggcggcgcgggcaacaacatcgtc
atcggcgacgacgccagccagagcgtcttcctgggaccggaggatgaccagttgtccggc
ggtggcggtgacgacgtgatcggcagcgccgggggcaacgacctgttgtcgggcgacgcc
ggcaacgacgcggcggccggcggcatcggcaacgacagcgtttccggcgggaccggcaac
gacgtgctgcagggcgggcgcagcgaccgcggccactgggacttcacgctggctgccgac
ggtacgctgagcgcgggccaccagacgctgatgttcgccccggcgcagagcgagacgctg
gcacgcgcggagctcgatgcgggggcggatgcgctcttgttcctggcggcggaggcggtg
tcgctgcgcgacatcgcgctgctgtaccacggcgcgttcggccgcgcggccgacctgccg
gggttgaacttctacgtcgagcaaggggcgtcgctgacccaggtggcgcaatcgttcctc
aggtcgccggaatgggccgcatcgccgctgaacgtgacgaccgacagcgcctatgcgcag
gcgctgtaccggcaggtgctggggcgcgaaggcgaggcgacgggcgccgcgcactggctc
gccaagctggccggcacggacgggccggcgctgtcgcgtgccgacgtgctggtggcgttc
gccaccagtcccgagcaccgcgcacattatgccgacggtatcgtcgtcgcggcggcggat
gtgacggccgagcaaggctggatcaccggcagcggcgacgatcgcctcgacgggggcgcc
ggcaacgacgtggtggttggcggcgacggcatcgatacggccgtctttgcgggcaagcag
tccgactggggcctgctcgtgacgggtggcgaggccgtcgtgctgacgaatgcgtcggcg
ggcgaggcggatacggtgtccggcatcgaacggagcgaattcgccgacggcacgctggac
ctgtcatttacccaggggggcaggtcgaaacgctgggcctgctgtaccaggccgtgctgg
atcgcgccgccgacctgcctggcttggcatggtgggccggccagcatctga
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