Pseudoduganella plicata: E1742_09685
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Entry
E1742_09685 CDS
T06563
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E1742_09685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpli03021
]
E1742_09685
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_09685
Enzymes [BR:
mpli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E1742_09685
Transcription machinery [BR:
mpli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E1742_09685
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E1742_09685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QBQ36402
LinkDB
All DBs
Position
2206204..2206407
Genome browser
AA seq
67 aa
AA seq
DB search
MARITIEDCLQNVPNRFQLTLAATYRARQLLQGHTPKVEAKDKPTVLALREIAAGKVGLE
MLKKVPM
NT seq
204 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtatcaccatcgaagattgcctgcagaatgtgccgaaccgcttccagctgacg
ctggccgcaacgtaccgcgcccgccagctgctgcagggccatacgccgaaggtcgaagcc
aaggacaagccgaccgtgctggccctgcgcgaaatcgctgccggcaaggttggcctggaa
atgctgaaaaaggtcccaatgtaa
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