Pseudoduganella plicata: E1742_12080
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Entry
E1742_12080 CDS
T06563
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00521
Streptomycin biosynthesis
mpli00523
Polyketide sugar unit biosynthesis
mpli00525
Acarbose and validamycin biosynthesis
mpli00541
Biosynthesis of various nucleotide sugars
mpli01100
Metabolic pathways
mpli01110
Biosynthesis of secondary metabolites
mpli01250
Biosynthesis of nucleotide sugars
Module
mpli_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E1742_12080 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E1742_12080 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
E1742_12080 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E1742_12080 (rfbB)
00525 Acarbose and validamycin biosynthesis
E1742_12080 (rfbB)
Enzymes [BR:
mpli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
E1742_12080 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QBQ36823
UniProt:
A0A4P7BF60
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All DBs
Position
complement(2779145..2780218)
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AA seq
357 aa
AA seq
DB search
MIFVTGGAGFIGANFVLDWLAQGDEGVVNFDKLTYAGNVNNLAALQDDPRHVFVRGDIGD
GEHVLALLREHQPRAIVHFAAESHVDRSIHGPAEFIATNINGTFALLEAARAYWSALDAA
GKAAFRFLHVSTDEVYGTLGPDDAPFTETTAYAPNSPYSASKAASDHLVRSYHHTYGLPT
LTTNCSNNYGPYQFPEKLIPLILANAQAGKPLPIYGDGRQVRDWLYVADHCAAARRVLDA
GVPGETYNVGGWNEMTNLDVVHTLCDILDSLQPKADGGSYRSQIAYVQDRPGHDRRYAID
ARKLERELGWRPAETFETGIRKTVQWYLDHPDWVADVQSGAYARWVETNYVHRGDVR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgtgacaggcggggccggttttatcggcgccaatttcgtgctggactggctg
gcgcaaggcgacgagggcgtcgtcaatttcgacaagctgacctacgccggcaacgtcaac
aacctggcagcgttgcaggacgatccgcgccacgtgttcgtgcgcggcgatatcggcgac
ggcgagcacgtgctggccctgctgcgcgagcaccagccgcgcgccatcgtgcactttgcc
gccgaaagccacgtggacaggtcgatccacggtccggccgaattcatcgccaccaatatc
aacggcacgttcgccctgctggaagcggcgcgtgcctactggagcgcgctcgatgctgcg
ggcaaggcggccttccgcttcctgcacgtctccaccgacgaggtgtacggcacgctcggc
cccgacgatgcgccgttcacggaaaccacggcctatgcgccgaacagcccgtactcggca
tcgaaggcggcgtccgaccacctggtgcgctcctaccatcacacctacggcctgccgacg
ctgacgacgaactgctccaataactacggcccgtaccagttcccggagaagctgattccc
ctgatcctcgccaacgcccaggcgggcaagccgctgccgatctatggcgacggccggcag
gtgcgcgactggctgtacgtggcggatcactgcgcggcggcgcgccgggtcctggacgcc
ggcgtcccgggcgaaacctataacgtgggcggctggaacgagatgactaacctggacgtc
gtgcatacgctgtgcgacatcctggacagcctgcaaccgaaggccgacggcggcagctac
cgcagccagatcgcctacgtgcaggaccgtcctggccacgaccgccgctacgcgatcgac
gcgcgcaagctggaacgggaactgggctggcggccggccgagacgttcgaaacgggcatc
cgcaagacagtgcagtggtacctggatcatccggactgggtggcggacgtgcagtccggc
gcctatgcccgctgggtcgaaacgaactacgtccaccgaggagacgtccgatga
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