Pseudoduganella plicata: E1742_12120
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Entry
E1742_12120 CDS
T06563
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_12120
Enzymes [BR:
mpli01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E1742_12120
DNA repair and recombination proteins [BR:
mpli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E1742_12120
Prokaryotic type
E1742_12120
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
FlgT_N
Motif
Other DBs
NCBI-ProteinID:
QBQ36831
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All DBs
Position
2786288..2787718
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AA seq
476 aa
AA seq
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MPVSNPSPATLVWLRRDLRSFDHAALHRALQEGGPVYCAFVFDTPILAGLPREDRRVAFI
HATLTELASELEKLGGHLIVRHGDARDVIPALAAELGAATVHANDDYDPQAIARDRAIAA
ALEQSGRRLCLHKDHVILHKEEVLSQAGKPLTVFTPYKNAWLKKLNLDPSLLAPLHVDPY
AARLAPGRSTLPTLAQLGFDDVDLAAIGIEGGMTGGAAAFDAFVPKLAPYGVARDFPAQR
GTSQLSLHLRFGTVSIRHVVRTIRDIAAAGHGGDGGAVWLAELIWREFYQQILYHFPHVV
RSAFKPVYDRIQWETGAEADAMFAAWCEARTGYPLVDAAMLQLHRTGFMHNRLRMVTASF
LVKDLGIDWRRGEAWFALKLNDYELASNNGGWQWAASSGCDAQPFFRIFNPVTQSQKFDA
EGTFIKSFLPQLGKLNAKEIHAPWLAPGKAAGYPPPIVQHDVARQRTLERYAVVKA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtaagcaatccctccccggcaacgttggtctggttacgccgcgacctgcgctcc
ttcgaccacgccgcgctgcatcgcgccctgcaggaaggcgggccggtgtattgcgccttc
gtcttcgatacccccatcctggccggactgccgcgtgaggaccgccgcgtggccttcatc
catgcgacgctgacggagctggcaagcgaactggaaaagttgggtggccacctgatcgtc
cgccacggcgatgcacgcgacgtcatcccggcactggcggcggaactgggtgccgcgacc
gtccacgcgaacgacgactacgatccgcaggccatcgcgcgcgaccgggccatcgccgcg
gcgctggagcagagcggacgccggctctgcctccataaagaccacgtgatcctccacaag
gaagaggtgctgtcgcaagcgggcaaaccgttgacggtgtttacgccatataagaacgcc
tggctgaagaagctcaatctcgacccgtctctgctggcgccactgcatgtcgatccgtac
gccgcgcgtctggcgccgggacgcagcacgctgccgacgctggcgcagctgggcttcgac
gacgtggatcttgccgccatcggcatcgaagggggcatgacgggcggcgcggctgcgttc
gacgccttcgtgccgaaactggcgccatatggcgtcgcgcgcgacttccccgcgcagcgg
ggcacgtcgcagctgtcgctgcacctgcgtttcggtactgtttccattcgccacgtggta
cgcacgatacgcgacatcgcagccgccggtcatggcggcgacggcggcgccgtctggctg
gccgaactgatctggcgcgagttctaccagcagatcctgtaccacttcccccacgtcgtc
cgttccgcgttcaagccggtctacgaccgcatccaatgggagaccggcgccgaagccgat
gccatgtttgccgcctggtgcgaagcccgcaccggctacccgctggtggacgcggccatg
ctgcagctgcaccgcacaggcttcatgcacaaccggctgcgcatggtaacggccagcttc
ctcgtcaaggatctcggcatcgactggcgccgcggcgaagcctggttcgcgctgaagctg
aacgactacgaactggcctcgaacaacggcggctggcagtgggcggcatcgtccggctgc
gacgcccagccgttcttccgcatcttcaaccccgtcacgcagtcgcagaaattcgacgcg
gagggcacgttcatcaaatccttcctgccgcagctgggcaagctgaacgcaaaagagatc
cacgccccatggctggcgccaggcaaggcggccggctatccgcctcccatcgtccagcac
gacgtggcgcgccagcgcacgctcgaacgttacgcggtcgtgaaagcataa
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