Pseudoduganella plicata: E1742_12495
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Entry
E1742_12495 CDS
T06563
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1742_12495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpli03019
]
E1742_12495
Messenger RNA biogenesis [BR:
mpli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E1742_12495
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
NUDIX
GAIN_A
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QBQ36893
UniProt:
A0A4P7BFD1
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All DBs
Position
2875799..2876413
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AA seq
204 aa
AA seq
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MLDREGFRPNVGIILLNAHNEVWWGKRVREHSWQFPQGGIKYGETPEQAMYRELEEEIGL
RPEHVKIVGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMCARDSEVNLRLTDHPE
FDAWRWHEYWVPLDVVIEFKREVYQRALQELSRFLSWPPHGERRHSARYLRQPHGRGQQG
QTSKDVPAQEVVGCDGTALAGAKR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgggaagggttccgccccaacgtcggcatcatcctgctcaacgcccataac
gaggtgtggtggggcaagcgggtgcgcgagcactcatggcaatttccgcagggcggcatc
aagtacggcgagacgcccgagcaggcgatgtatcgggagctggaagaggagatcggatta
cgaccggagcacgtcaagatcgtcgggcgcacgcgcgactggctgcgttacgaggtgccc
gatcacttcatcaagcgtgaaatccgcggccattaccgtggccagaagcagatctggttc
ctgctgcggatgtgtgcgcgcgacagcgaggtcaatctgcgcctgacggatcatcccgaa
ttcgacgcgtggcgctggcacgagtactgggtaccgctcgacgtggtgatcgaattcaag
cgcgaggtctaccagcgcgcgctgcaggagctgtcgcgtttcctgtcatggccgccgcac
ggcgaacggcgccattcggcccgttatctgcgtcagccgcatggccgcggccagcagggg
cagacgtcgaaggacgtgccggcccaggaggtcgtcggctgcgacggcacggcgctcgcc
ggcgccaagcgctga
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