KEGG   Pseudoduganella plicata: E1742_12570
Entry
E1742_12570       CDS       T06563                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
mpli  Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:mpli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpli03032]
    E1742_12570
   03036 Chromosome and associated proteins [BR:mpli03036]
    E1742_12570
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mpli02048]
    E1742_12570
Enzymes [BR:mpli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     E1742_12570
DNA replication proteins [BR:mpli03032]
 Prokaryotic type
  DNA Topoisomerases
   E1742_12570
Chromosome and associated proteins [BR:mpli03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    E1742_12570
Prokaryotic defense system [BR:mpli02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    E1742_12570
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: QBQ36906
LinkDB
Position
2890328..2892325
AA seq 665 aa
MATKKPVSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGHCKNI
VVTQNADGSITVEDDGRGIPVGLHPEENVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGLH
GVGVSVTNALSKRLEISVWRKDDKGNGFHALAFENGDLVEPLTSTPAPKDGKKSGTRVTA
WPAAKYFDSPLISQVELQRLLRSKAVLLPGVTVTLKNEKTGDSQTWQYNDGLRGYLTEAL
AQTGNGETVVPLFEGEQFAGPDAEGFAEGEGASWVVAWTEEGAIIRESYVNLIPTPNGGT
HESGLREGLFGAMKNFVELHSLLPKGVKLLPEDVFARASFVLSAKVLDPQFQGQIKERLN
SRDAVRLVATYSKPALELWLNQHIDWGKKLAELVIKQAQSRLRSAQKVEKKKSSGVAVLP
GKLTDCESSDVSRTEIFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNSWETDRDRLFAN
NEIHDIAVAIGVDPHSATDTPDLSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPALI
QNGNICIARPPLYRVDAPARGKKPIQKLYALDDGELTAIEDKLRKDGLKDGSWSISRFKG
LGEMNAEQLWETTMNPDTRRLLPVALGDFQHTEAAARFNMLMGKGEAAARRAWIEEHGNE
VEADI
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggccactaaaaaacctgtttccgattacagcgaatcatcgatccgcgtcctgaaagga
ctggagcccgtcaagcagcgcccgggcatgtacacccgcacggaaaacccgctgcacatc
atccaggaagtgatcgacaacgcctcggacgaggcgttgggcggccattgcaagaacatc
gtcgtcacgcagaatgcggacggcagcatcacggtcgaagacgacggccgcggcattccc
gtcggcctgcacccggaagaaaacgtgccgacggtggaaatcgtcttcacccggctgcac
gcgggcggcaagttcgacaagggctcgggcggcgcgtatgcgttctccggcggcctgcac
ggcgtgggcgtttccgtcaccaacgcgctgtcgaagcgcctggaaatctccgtctggcgc
aaggacgacaagggcaacggcttccacgccctcgccttcgagaacggcgacctggtcgaa
cccctgacctcaacgccagcgccgaaggacggcaagaagtccggcacgcgcgtgaccgcc
tggccggccgcgaagtatttcgattcgccgctgatctcgcaggtcgagctgcaacgcctg
ctgcgttccaaggcggtgctgctgccgggcgtcaccgttacgctgaagaatgaaaaaacc
ggcgactcgcagacatggcaatacaacgacggcctgcgcggctacctgacggaagcgctg
gcgcagacgggcaatggcgaaacggtcgtgccgctgttcgaaggcgagcagttcgccggc
ccggacgcggaaggctttgccgaaggcgaaggcgcgtcgtgggtggtggcgtggacggag
gaaggcgcgatcatccgcgaatcctacgtcaacctgatccccaccccgaacggcggcacg
cacgaatcgggcctgcgcgaaggcctgttcggcgcgatgaagaatttcgtcgagctgcac
tcgctgctgccgaaaggcgtcaagctgttacccgaggacgtgtttgcgcgcgcctccttc
gtgctctcggccaaggtgctcgatccgcagttccagggccagatcaaggagcgcctgaac
tcgcgcgacgccgtgcgtctggtcgccacgtactcgaagccggcgctggagctgtggctg
aaccagcacatcgactggggcaagaagctggccgaactcgtcatcaagcaggcgcagtcg
cgcctgcgctcggcccagaaggtcgagaagaagaaatcgtccggcgttgccgtcctgccg
ggcaagctgacggactgcgaatcgtccgacgtatcgcgcacggaaatcttcctcgtcgag
ggcgattcggcgggcggctcggccaagatgggccgcgacaaggaattccaggccatcctg
ccgctgcgcggcaaggtgctcaattcgtgggagacggaccgcgaccgcctgttcgccaac
aacgaaatccacgatatcgccgtggccattggcgtcgatccgcacagcgcgaccgatacc
ccggacctgtcgggcctgcgttacgggaaaatctgcatcctgtccgacgcggacgtggac
ggctcgcacatccaggtgctgctgctgacgctgttcttccgccatttcccggcgctgatc
cagaacggcaacatctgcatcgcccgtccgccgctgtaccgcgtcgatgcgccggcgcgc
ggcaagaagccgatccagaagctgtacgcgctggacgacggcgaactgaccgccatcgag
gacaagctgcgcaaggacggcctgaaggacggcagctggtcgatctcccgcttcaagggc
ctgggcgagatgaacgccgagcagctgtgggaaacgacgatgaacccggacacgcgccgc
ctgctgcccgtggcgctgggcgacttccagcacacggaagcggccgcccgcttcaatatg
ctgatgggcaaaggcgaagccgccgcccgccgtgcatggatcgaagaacacggcaacgaa
gtcgaagcggacatttaa

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